Lagopus muta (rock ptarmigan): 125692799
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Entry
125692799 CDS
T09141
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125692799 (JMJD1C)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125692799 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
125692799
NCBI-ProteinID:
XP_048799699
LinkDB
All DBs
Position
5:complement(39473272..39618850)
Genome browser
AA seq
2357 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAPKQNSHQH
QQQRNTRPSKRKGSDSSMPDEEKVKEERFDYIGRAENPKNKNKHFLSKRRKPEEDEKKLN
MKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNASKINGEEGKSQTVERVE
QTLTDRRSPWDEVQEDKKCEEPERLKSSLLDQQEKPSLHAAEQPTPYEQNSKDPHVQECN
AEKHLAAELKNEQFVPKPPTPKSIVDKTSKNNSEKESQENAASTFGLQTVQKTESHSSDL
KQQFANANFLEARKQEGDQSWVSCVVNKMDLIQPGVVKALPVNEHLNPEKEKVQYGSFMS
SLNVASVAEDSKLRKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTPSSDTVKSKVSSQN
SHTPGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQET
GTNHISPFLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLPGSSTQTPLSAINTHPLST
APHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHL
LGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPW
LHQPTPVTSADSLGLLSHIPVRPSSAEPLRPLKLATHSSPPLSKSIVEHHKEELERKAFI
EPLRSAAAAPIKTELEQSRTQAAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRR
ILQESIEVAPFTAKMKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSV
PQSLPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCPSTAASPQSLPSYVSSLSK
PPPLIKHQPESEGSVSKVPEQLSQSVQSHSVGSFRNDSRSPTQLSVSSSNALRSMPALHR
APVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVY
KGSSEQNLSEVWKSNNAAASEKVDWHAERASGKSQSATASVIVRPPSSTKYESVAAVQSA
SKDRVSERSSAVTNQADCLKTAEAKETGRVILPNMNSDSARTQYEKKFPAVSQGTVARSV
TPNTAMICSTKMDVTTSAATTTSVLSWGSSEVTYSSSSTALACTPLESAGSRAAGQAAAP
AQECKGSTPAPAAPVPGKAGSAAQPSPGFSTSADFVHLKKHKAALAAAQFKSSNPSETES
NSVKNQTFSTSLSLDSAIVCNTINKANSVGSGQASQASQPNYHTKLKKAWLTRHSEEDKN
TNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKAKRTYES
GSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQRKKGDAEEEVKPNGVLSRSAKEKSKL
KLQSGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGE
EPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETCK
YILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKC
GFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNI
RDKFEIKSHCQCTSKQSMQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPPKSE
TNGNASPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQD
SLESQNCKSSPTASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASSKSGR
TMPNILDDIIASVVENKIPPNRAPKMNVKSEVKDEPKEDRKCIQDDGNKLYSDIQYSWIC
DKHVLWLRDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADIL
NCKDSIISNTNVKEFWDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYEDLLK
SLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVV
NILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIR
EFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAG
ALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEM
VRALKIHESEMEDMEEN
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccatactccttaaatggttatagggtgagagtgtacagacaggattctgcc
acccagtggtttactgggatcattactcatcatgatctcttcactcgcactatggttgtt
atgaatgaccaggtattagaacctcagaatgttgatccttctatggttcagatgactttt
ctagatgacgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccgg
cggtctcgttccaaccagaacagcaacacagttcacggtcattatacacgtgcacaagca
aatagtcccagaccagcaatgaattcccaaactgcaccaaaacagaattctcaccagcac
cagcagcagaggaatactaggcccagtaagcggaagggttctgatagcagcatgcctgat
gaagagaaggtgaaagaggaaagatttgattatataggtcgagcagaaaaccccaaaaac
aaaaataaacactttcttagtaaaagaagaaaacctgaagaggatgaaaagaaattaaat
atgaagagactgcggacagacaatatctcagattactctgagagcagtgactcagaaatc
tcaaataaaagattaacagattcatcctcagagcagaactcagagaatgagttaaaaagc
aagaacgcttcaaagataaatggagaagaaggaaagtctcaaactgttgagagagtagaa
cagacactaacagataggcggtctccatgggatgaagtacaggaggataaaaaatgtgaa
gagccagaaaggctgaagtcgtcgctcttagatcagcaggaaaagccttcgctccatgca
gcagagcagccaacaccttacgagcagaattccaaggatccacatgttcaagagtgcaat
gcagagaaacatctcgctgcggaattaaaaaatgagcagtttgtgcccaaacctcccact
ccgaaaagcattgttgataaaactagcaaaaacaactctgaaaaggagagccaggaaaat
gctgcaagtacctttggattgcaaacggttcagaaaacagaatctcatagcagtgattta
aaacagcagtttgcaaatgcaaatttcctggaagcacgaaagcaggaaggtgatcaaagt
tgggttagctgtgttgtaaacaaaatggatttgatacaacctggtgttgtgaaagcatta
ccagtaaatgaacatttaaatcctgagaaagagaaagtgcagtatggctcatttatgtct
tcgttaaatgtagcttctgtagcggaagacagtaaactgcgtaaacaaagtccagtccct
gattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgat
gttaagcctaaattcaccccatcttctgatactgtgaagtctaaggttagttcccaaaac
agccatactcctggattaacaaggtcagccaataaaaccgatcatgatttgcctaggtct
agttttcatccagttccagctagagttagcgctctagaagctactaaaagtcctcttata
attgacaagaacgaacatttcacagtgtacagggatcccactctgattggacaagaaaca
ggaactaatcacatttcaccttttttgcatcagcataattatcctctgcattcctcatcc
caccgaacctgtttaaatccaaatgctcatcatcctgcattaactggttcatcccatctg
ctgcctgggtcttcaactcagacccccttgtctgctattaacactcacccccttagtacc
gcccctcaccattccgttcatcaccctcatctacttcctgcagtgttgcccggagtgcct
gctgcctccttgctgggtggccacccgcgactagagactgctcatgctagcagcctaagc
catttggcattggctcaccagcagcagcaacagatgttacaacaccagtctccacatctt
ctcggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttgg
cagtatccaaatggaacacatgcttactcaggactcggcctgccctcctcgaaatgggtc
cacccagaaactcctgttaacgcagaggcttccttgagaaggaatactcccagcccgtgg
ttacatcagcccacccctgtgacctcagctgacagccttggattgctgagtcacattcct
gtgcgaccatccagtgcagaaccccttcggcctctcaaactggcaacacattctagccca
ccactgtccaaaagcatagtagagcatcacaaggaagaattggagaggaaagcatttatt
gaacctttacgttctgctgcggctgcgccgataaagacagagctggagcaaagcagaaca
caggcagcaaaggagagccatatgcacagacattttgcagatccaatgttgaaccagctg
ccaaggccgccacaggagacgggggagcgactgagcaaatacaaagaagaacacaggcga
atactccaagaaagtattgaagttgctccttttacagctaaaatgaaggcactggaggga
gagagagagaactattccagggtaacatccttatcttcaagtcccaaaagccattcagta
aagtatgacaaagatgcagaacgctctgtgtcagaactgtacaaaatgaagcattcggtt
ccacagagtttgccacagagtaactatttcaccaccttgtctaatagcgtggtgaatgaa
ccaccgaggtcttacccgtccaaggaagcttcgagtgcatatgttgataagcaaactaat
tgtccttcaacagcagccagtcctcagtctcttccttcttacgtttcttctctctcgaag
cctcctcctttaattaagcatcaacctgagagcgaaggctctgtgagcaaggtccctgag
cagctctcacagtccgtgcagtctcactcggttggttcttttagaaatgacagcaggagc
cctactcagttgtcagtctcgtcttcaaatgcactccgaagcatgcctgccttgcacaga
gcgcccgtgtttcatccccctgtgcaccagaacctcgagaagaaagaaagcagctacagc
agcctttcgcctcccactctgacccccgttcaacctgttaatgctggtggtggtaagata
caggaactgcagaaaccgccaactttagtacctgaacctaaggaagctcagactgtttac
aagggctcttctgaacagaatttatcagaagtgtggaagtctaacaacgccgccgctagt
gaaaaagtggactggcatgctgagagagcgagtggaaagtcacagtccgccacggcatct
gttattgtgcgtcctccttcgagcacgaaatacgagagcgtagcagcggtgcagtcagct
tccaaagatcgagtcagtgagagatcttcagctgtgacaaatcaagcagattgcctgaaa
acagcggaagccaaggagactggaagagtcattctgccaaatatgaactcagacagcgct
cgcacacagtatgaaaagaaatttccagctgtctcgcaaggcactgttgctcgttctgtc
acccctaacacagctatgatctgcagtaccaaaatggacgtgaccacatctgcggccaca
actaccagcgtgttgagctggggcagctcagaagtgacttattcctcatcaagcacagcc
ctggcctgcacgccactggagagtgccggctcgagagctgcaggtcaggcagcagcaccg
gcccaggagtgcaagggcagcactccggcgccagctgcacccgtccctggcaaggcaggc
agcgctgcgcagcccagccccgggttctccacctctgccgacttcgtccatttgaaaaag
cacaaggcggcgttggccgcagctcagttcaaaagtagtaaccccagcgagaccgagtcc
aactctgtgaaaaatcagacattttcaacctctctctccctagacagtgctatcgtctgt
aatacaataaacaaagcaaactctgtaggcagtgggcaagcttcccaggcgagtcagcca
aactaccacactaaactgaaaaaggcttggctgacaagacattcagaggaggataaaaac
actaataaaaaagagaattcagggaacagcgtttcagaaattattaagccatgtaccgtc
aatttaatagcttctacatcaaatgatttgcaaaataacatcgatagtaaaatcttggcg
gataagtttgtgaaggaagataagcaccctagaagaaaagcaaaacgaacttacgagtct
ggctctgaaagcggagactctgatgaaagcgagagcaagtcagagcaaaggactaagcgg
cagcccaagccaacttacaaaaagaagcaaaacgatttgcagaggaaaaagggtgatgcg
gaggaagaagtaaaaccaaatggtgttcttagcaggagtgccaaagaaaaaagcaagctg
aagttgcagagcggcagtaacagcactggaatacctcgctcggtgttaaaggattggcgc
aaagtgaagaagctgaagcagactggagagtccttcttacaggacgattcttgctctgaa
attggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagcaagaagggtgaa
gaaccaactcactcaccggtgttctgtagattttactactttcgacggttatcttttagt
aaaaatggagtggttaggatagatggtttctcctctcctgatcagtatgatgatgaggca
ctgagtttatggacacatgaaaactatgaagatgatgaactggacctggaaacttgtaaa
tatattttagatatcataggggacaagttttgtcagttggtaacatccgagaaaacagcc
atgtcctgggtgaaaaaagacgccaaaattgcatggaagagagcagtgagaggagtccgt
gagatgtgtgatgcatgtgaagccacattatttaacattcactgggtctgccaaaaatgt
ggatttgtggtctgcctagattgttacaaggcgaaggaaagaaaaagttctagagataag
gaactgtacgcctggatgaagtgtgtgaagggccagcctcatgatcacaagcacctgatg
ccaacacagattatcccaggctctgttttgacagatcttctggatgctatgcacaatatt
agagacaaatttgaaataaaatcccactgtcagtgtactagcaagcaaagcatgcaagct
ggcaagctcccagcaatgaacggtgtgtctcaggttttgcagaatgtccttaatcacagt
aataaaatttctctgtgcatgcctgagtctcagcagcagaatacccctccgaagtctgag
acaaacggcaatgcaagtccgaggagcgatgtcagcacagacagcaagctaacgccgccc
gaatcccagtcaccgctgcattggttagctgatctggcagagcagaaagccagagaagaa
aagaaagaaaacaaagagtgtccttccggaaaacattcgaaggaggagaaagaccaggac
agtttggagtcccaaaactgtaaaagctcccctactgcatctcagaacaatgagcagggc
tcaaccttacgagatctgttaacaacaacagcaggcaaactgcgcctgggttctacagat
gctggtattgcttttgctccggtttactctacgggaacagcaagtagcaagagtggaagg
actatgccaaacattcttgatgatatcattgcttcagtggtagaaaacaagattccgcca
aatagagcaccaaagatgaatgtaaaatctgaagtaaaagatgagccaaaggaagacaga
aaatgtattcaggatgatggcaataagttgtacagtgatattcagtattcttggatctgt
gataaacatgttttgtggctcagagaccataaaaacagcaacaactggaagctcttcaaa
gagtgctggaaacaagggaggcctgttctagtgtctggtatgcataagaaaatgaacttc
agcctgtggaaagctgagtccattagtctagattttggaaaccagcaagctgatatcttg
aactgcaaagacagtattatttcaaacaccaacgtcaaagagttctgggatggttttgaa
gacgtttcaaaacggcagaaagtaaaaaatggagaaacagccctactgaaattgaaagat
tggccttctggtgaagatttcaaggctatgatgccagcaagatatgaggacttactgaaa
agtttacccttgcctgaatattgtagtccagaagggaaattaaatttggcttctcatctg
ccagggttttttgtccgtccagatttgggacccagactatgcagtgcatatggtgtggct
gctactaaagatcatgatataggaactacaaatctccatatagaagtttcggatgtagtg
aacatccttgtttatgttggcatagcgaaaggaaacggagtgctttccaagtcaggagta
ctgaagaagtttgaagaagaagatttggatgacctcttaaggaagcggttgaaagattca
agtgaattacctggtgctttatggcatatttatgctggcaaagatgctgacaagatcaga
gaatttctgcaaaagatagcaaaagagcaaggcttagaagttttaccagagcacgatcca
attcgtgatcagagttggtatgtgaacaaaaaacttcgccaaagacttctggaggaatac
ggtgtaaaaacctgtacggttattcagtttcttggtgatgctattattctaccagcagga
gcccttcatcaggtgcaaaattttcacagctgcgttcaagtaaccgaagactttgtgtct
ccagaacatcttgtacagtcgtttcacctaacacaggagctgaggctgtcaaaggaagaa
atcaattatgatgataaactgcaggttaaaaatatcttgtatcatgcagttaaagaaatg
gtgagagctttgaagattcatgaaagcgaaatggaagatatggaagaaaactaa
DBGET
integrated database retrieval system
