Lagopus muta (rock ptarmigan): 125692847
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Entry
125692847 CDS
T09141
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125692847 (TRMT13)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
125692847 (TRMT13)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125692847 (TRMT13)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Motif
Other DBs
NCBI-GeneID:
125692847
NCBI-ProteinID:
XP_048799857
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All DBs
Position
5:17957619..17963742
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AA seq
483 aa
AA seq
DB search
MAEREAAGGGSGSGAGPLPGRCAFFVQRKRRFCKMVPAPGRRFCGEHGQQEKENDRKRIP
CPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGVKEVAEIPANQVTLSSLSKEE
LENLIIKLKKASNGLELDLKEQVLSHQALEEALNDPKNGDSAFKHLKQQASILGNMEKLH
LLGPGRCFVEFGAGRGKLSHWVDIALQDTENIQFLLVERATTRFKVDGKHKKRDSIFERL
QVDIQHLCLSHCVFRFVYFSDKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYATCC
NEEDEEPAPKRTKNKAEGASNSSNDDDNEGNKEDFKPVAGIVIALCCHHKCDWTHYVGRE
FFRSVGLGPVEFHYFQRMSSWATCGMRGTITKASTNEESEDHTTNTEEHDQIYSKTGTGS
DALQGLLTVEERKEIGSLCKLVIDHGRIRYLQHRGYKAALQYYTDSSVSLENVLLTAVPE
TTT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggaggcggccggcggcggctcgggctccggcgctggcccgctgccgggg
cggtgcgccttcttcgtgcagaggaagaggcgcttctgcaagatggtcccggcgcccggg
agacgcttttgtggggagcacgggcagcaggagaaagaaaatgacaggaaaagaattccg
tgccctcttgatccgaaacataccgtgtatgaagaccaactacaaaaacatttaaaaaaa
tgtaattccagagagaagccaaagccggtctactttgttcaagatattaatgcaggtgta
aaagaagtagcagaaataccggcaaatcaagtaactctctcttccctatccaaagaagag
cttgagaacttaattatcaagttgaaaaaagcaagtaatggtctggaacttgaccttaaa
gaacaagtactctctcaccaggctttagaggaagccttaaatgacccaaagaacggggac
tctgctttcaaacacttgaaacaacaggcttctattttaggtaacatggaaaaattacat
ttgcttggtccaggaagatgtttcgttgagtttggagctgggcgaggaaagctgtctcac
tgggttgatattgccttacaagatactgaaaatattcagtttttgcttgtagaaagggca
actaccagattcaaggtggatggaaaacataaaaagagagattctatatttgaaaggctt
caagttgatattcagcatttatgtttaagtcattgtgtatttcgttttgtttatttttca
gataaggtgcctattttagagaagaaaaaactaccagtggtaggaattgggaaacatttg
tgtggtgctgccacagatcttgctttgagatgtttggtagaaagttatgcaacttgctgt
aatgaagaagatgaagagcctgcaccaaaacgtacaaagaataaggcagaaggagcttct
aacagttcaaatgatgatgacaatgaagggaacaaagaagactttaagcctgtagctgga
attgttattgcgctgtgttgccatcacaaatgtgactggacacattatgtaggcagagag
ttctttagatcagtaggacttggaccagtagaatttcattattttcaaaggatgagtagc
tgggccacttgtggcatgagaggaaccataaccaaagcctctacaaatgaagaaagtgaa
gatcacactaccaacacagaagagcatgaccaaatatacagtaaaacagggactggttct
gatgctctacaagggctccttactgttgaagagcggaaggagataggttccctctgtaaa
cttgtgattgatcacggacggatcagatatttgcaacatcgaggatacaaggctgcacta
cagtactatacagattcctctgtgtccttggagaatgtcctgttgacagctgtcccagag
acaacgacgtga
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