Lagopus muta (rock ptarmigan): 125692972
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Entry
125692972 CDS
T09141
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125692972 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125692972 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125692972 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125692972
NCBI-ProteinID:
XP_048800190
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All DBs
Position
5:complement(36335539..36457497)
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AA seq
755 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASYNLSLTLQKSKRPVPVSTTPPKIDSPRAVIPHQKEPAWEINGNRATF
SPLTNTATGPMGSVLATNGTFSGYFNKEEISFSNSSSYLKTTAVRSSMSSQSVTPDVSPA
KSNLGSKLSPLLTDGNSPVRQLSPARQYNNPIGLYSAETLREMAEMHKLSLRRRASEGGL
PIGTLPIKDPHVDSASPVYQAVLKTQNKPEDETEDWSRRSANLQSKSFRILAQMTGTEFM
QDPDEEALRRSRDKENAAAASQNRATATTYVPKCVTSSILQPPQSCTVGANTGSAKPMAS
KGSVRPGVSTSQREASCVTTGHKVSLSSSSNRRVLAAPSSLSQPKPVLGSKNMSVAASTI
SSALSSQSSFNRHSSTSISYQSKRNTSQSYTPVPASASYGESPAASAASKPRVVTTASIK
PSVYQPAPAPVHSYTPANTEPASRPPWVTDESFSQKFAPGKTTTTVTKNILPRGAPVPPP
ASKSAYPSPVSASPLAPAIARGTIQRAERFPASNRTPLCGHCNSIIRGPFLVAMGRSWHP
EEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCSRCHTKIMGEVMHALRQTWHTS
CFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHD
TCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagcgtgactctgaatggacctggaccgtggggcttccgactgcaagggggc
aaggacttcaacatgcctttgaccatctccagaatcactcctggcagcaaggcagcacag
tcacagatgaatcaaggggaccttgtggtagccattgatggagtcaatactgacagcatg
actcacttagaggctcagaacaagatcaagtcagcaagttacaacctgagcctcactctt
cagaaatcgaaacgtccagtgccagtttcaaccacaccacccaaaattgactcacccaga
gctgtaattccccaccagaaggaacctgcttgggaaatcaatggcaacagagcaaccttc
agtcctctaactaacacggcgactgggcctatgggtagtgttttagcaaccaatggaaca
ttttcaggctacttcaacaaggaagagatcagcttttcaaatagctcttcttacttaaag
actaccgcagttagatcttccatgtcctctcagtccgtgactcctgacgtttcacctgca
aagagtaatctaggttcaaaactaagccctctactgactgatggcaatagtcctgtacgc
cagctgagccctgcaaggcaatataacaaccctattggcctttactcagcagaaactcta
agggaaatggctgagatgcataaattaagtctcagacggagggcttcagaaggtggactt
cctataggtacccttcctattaaagatcctcacgtagacagtgcatctccggtgtatcag
gctgttctcaaaactcagaacaagcctgaagatgaaactgaagactggagccgccgttct
gccaacctgcagtctaagtcttttcgcatccttgctcagatgactggaacagagttcatg
caagatccagatgaagaagccctgaggagatcaagagacaaagaaaatgctgcagcagca
tcacaaaacagggctacagctactacatatgtgccaaagtgtgtgacctccagtattttg
cagcctcctcagtcatgcaccgtgggtgccaacactggcagtgctaagccaatggcctcc
aagggctctgtgaggcctggagtgagtacaagtcagagggaagccagttgtgtcactact
ggccataaagtctctctttcttcatccagtaatcgaagagtgcttgcagcccccagctct
ctttcacaacctaagcctgtccttgggtccaagaacatgtcagtagcagcttccactatt
tcatccgctctctcatctcagtctagtttcaaccggcattcttccacctccatcagctac
cagtcgaagagaaacacaagccagtcatatacaccagtgccagcttctgcaagctatggt
gaaagtcctgctgcttctgctgcttcaaaaccaagagttgtcactactgctagcataaag
ccctctgtctaccagccagcacctgcaccagttcattcctacacccctgccaacacggag
ccagcaagccgtcctccctgggtaacagatgagtcattttcccagaagtttgcacctgga
aaaaccaccaccactgtcacgaagaacatccttccgaggggggctccagtaccacctcct
gcctctaaatctgcatacccgtctccagtttcagcttctcccctggctcctgcaatagcc
cgaggaacaattcagagggctgagcgttttccagccagcaaccgaactcctctctgtggg
cactgtaacagcataattcggggtcccttcctagtagccatgggtcgctcttggcaccca
gaagaattcaactgtgcttactgcaagacatccttggctgatatgtgctttgtggaagag
cagaatagcgtatactgcgagcgctgttatgagcagttctttgcaccgacctgctccaga
tgccacactaagatcatgggggaagtgatgcatgccctaagacagacttggcacacgagt
tgctttgtttgtgctgcttgtaagaagccatttgggaatagtctctttcacatggaagat
ggagaaccttactgtgagaaagattacattgctttgttcagcacaaaatgccacggctgt
gattttcctgttgaagctggagataaattcattgaagcccttggacatacttggcatgat
acctgcttcatttgtgctgtatgccatgtgaatttggaaggtcaaccattctactccaag
aaggataagccactgtgcaagaagcatgcccatgccatcaatgtttaa
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