KEGG   Lagopus muta (rock ptarmigan): 125693009
Entry
125693009         CDS       T09141                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lmut  Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lmut03036]
    125693009 (KDM4A)
Enzymes [BR:lmut01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125693009 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125693009 (KDM4A)
Chromosome and associated proteins [BR:lmut03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125693009 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5
Other DBs
NCBI-GeneID: 125693009
NCBI-ProteinID: XP_048800306
LinkDB
Position
5:complement(9860647..9884442)
AA seq 1058 aa
MASELESLNPSARIMTFRPTMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWKPRKCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDVVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKSGRQYAEDMETGEGCKEELDGDETKSVPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSAQDEANAAEPCERATGEVTQQSEQGHKVPDRVGMAKSEELKVVKLEEEEEEQEAAVL
DLSISHTSNSASVLPTSKQSAPSSVQPSSPAYSGSSDSESTDLLPKRTLPEPAGVLTVHS
YARGDASGSDNEQTSGKKASATAGVNEQELAEVTKEYIQSMKESKKSKGRRQPLSKLPRH
HPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQSP
HCAVCMLFQTYQAECGGSSQNSGVTPGAADGKIRTKPLIPEMCFTTTGCSTDLNLSTPYL
EEDGTSVLITCRNCQVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQR
ANDDKWVHVMCAVGVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQC
SHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIVI
SKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVR
WTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRF
TEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3177 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaaccctagcgcgcgcatcatgaccttccgccccacc
atggagcagttccgggacttcagccgttacatcgcgtacgtggaggcgcagggagcgcac
cgcgccgggctggccaagatcgtgccccccaaggagtggaagccgcggaaatgctacgac
gacatcgacgagctggtgatccccgcgcccatccagcaggtggtgaccgggcagtccggg
ctcttcacgcagtacaacatccaaaagaaggccatgacggtgcgcgagttccgtcggatc
gccaacagcgacaagtactgcacacctcgctacacagacttcgaagaccttgaacgaaag
tactggaagaaccttacattcaacgcccccatctatggtgctgatgttaatggcacactt
tatgacaagcatgtggatgcatggaatattggcagattgaacacgatcctggatgttgtg
gagaatgagagcggcataaccattgaaggagtgaatactccttacctctattttggcatg
tggaaaacttcatttgcttggcatactgaggacatggatctctacagtattaattacctg
cattttggggagcctaagtcgtggtactctattcctccagagcatggcaagcgactggag
agacttgccaaaggattctttccaggaagtgcccagagctgtgaagcgtttctccgtcac
aagatgaccttgatctctccatcgattctgaaaaaatacggcatcccatttgataaggtg
acacaggaggcaggagagttcatgataacttttccttatagttatcatgctggctttaat
cacggatttaactgtgctgaatccaccaactttgctactcttcggtggattgagtatggg
aagcagtctgtattgtgttcgtgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagaccgttacaagctttggaaagctgggaaggatgtgactgtc
attgaccacgctcttccaacaccagaagcagctgagttcctcaaaggggatctcatgcaa
aaggtcaagagtgggaggcaatatgctgaggatatggaaacaggagaaggatgtaaagag
gaactggatggggatgagacaaaaagtgtgcccaagcatcgcataggaacaaaaaggcac
agagtgtgcctggaagtacctcaggaagtgagtgagagcgaggccttccccaaagaggag
ctgagctctgctcaggatgaagcaaatgctgcagaaccttgtgagagagctacaggagaa
gtgacgcagcagagtgagcagggacacaaggttccagatcgtgtgggcatggctaaatct
gaagaactgaaagtggtgaagcttgaggaagaagaggaagagcaagaggcagctgtgttg
gatctctccatctcccatacttcaaattctgcttcagttttgccgacttcaaagcagagt
gcaccttccagtgttcagcccagctcaccagcatattcagggtcttcagactctgaatca
actgatctgttgccaaaaagaactctacctgagccagctggggtgcttacagtccatagc
tatgctagaggggatgccagcggatctgacaatgaacagacttcaggaaagaaagccagt
gctacagccggtgtgaatgaacaagaattggcagaggtaacaaaggaatacatacaatca
atgaaggagagtaagaagtccaagggtcgtcgccagccattgagtaagctcccacgccac
cacccgcttttggttaaagactgcattagtgatgatgaggcatcagagcaactaactcct
gaagaagaagctgaggagacagaagcttgggccaagccacttagccagctctggcagaac
cgaccaccaaattttgaggctgaaaaagagtacaatcggaccatggctcagcagtctcct
cactgtgctgtttgcatgctcttccagacgtatcaggcagaatgtggaggcagcagtcag
aactctggagtaactccaggtgctgcagacgggaagatccgaaccaagcccctgattcct
gaaatgtgcttcaccacaactggctgcagcactgatctcaatctttcaaccccttactta
gaggaagatggaaccagcgtgctcatcacctgcaggaactgccaagtctgcgttcatgca
agttgttatggtgtatcccctgacaaggccactgaagactggatgtgctccaggtgtaca
gaaaatgccttagaagaggactgctgtttgtgttcattacgaggaggagcactgcaaaga
gccaatgatgacaagtgggttcatgtcatgtgtgctgtaggtgtactggaagcaaaattt
gtgaacattgcagagcgcagtcctgtagatgtcggcaagattcccctgcaacgtttcaga
ctgaaatgcatcttctgcaaaaaacgaaggaagagaattgcaggttgctgtgtacagtgc
tcccatggtcggtgtcccacatcctttcatgtcagctgtgcccaggcagcaggagttatg
atgcagcctgatgactggccatttgttgtcttcattacctgcttcaggcataagatccca
tctcaggcagagcgagctaaggctgcactgcaggatctgtcacctgggcagatagtcatc
agcaagcacaagaatggccgcttctatcagtgtgaagtggtcagcctcgcaaaagagact
ttctacgaggtcaactttgatgatggttccttcagtgataacctgtatccagaggacatt
gtgagtcgagactgtcttcagttgggtcctccagctgaaggtgaagttgtgcaggtgaga
tggacagatggacaggtttatggagccaagtttgttgcatcacatgcaatccagatgtac
caggtggaatttgaggatggttcacagctgatggtgaaaagggatgatgtgtacactttg
gaagaggagcttcctaagagagtcaagtcaaggctgtcaatagcttcagatatgcgcttc
acagagatcttcgcagagaaggaggtcaggcaggagaggaagaggcaaagagtgatcaat
tcacgctaccgggaagattacattgaacctgccttgtaccgggccatcatggagtaa

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