Lagopus muta (rock ptarmigan): 125693051
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Entry
125693051 CDS
T09141
Symbol
EFCAB7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125693051 (EFCAB7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125693051 (EFCAB7)
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
EVC complex
125693051 (EFCAB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF_assoc_2
EFhand_Ca_insen
Urocanase_N
UPF0154
Motif
Other DBs
NCBI-GeneID:
125693051
NCBI-ProteinID:
XP_048800410
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Position
5:complement(2087105..2114545)
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AA seq
627 aa
AA seq
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MASSPGSNAALDQKGTDSEGSQAKQSQHAEEAIFYKNCRAAYLTIFKSSLENIKSKEQLT
LVLQQAGRNPSQKTVNKYWTSQTTTLNFDDFCTILKEETPSAKTELLEAFGKIDTDNTGY
ILHDELYQLLTTEGEKMTLDEVNAVIKLPDFNCNGKLDYKKFCDLFVATSEQCCRTALEK
LEADGRLRHRQFGSEAEASPAGLTVPVSKPSLKISRKADHKPAPTKGDSRTPSRPAQSCR
ASSSSTISVCASSNRSTNLLEPNTMKEWQCAQSKGCFYLEEDGEIVAHKYRLHLPQRSAV
CITIKPLRLRQIEGKSCRWLSVDTVLYVLKENETTENLQLVCSTDQQNREMFGWKGELPS
GVYWLLPFTTGCRLKKAKTPITGEAKLVYRDEDGELALTKEFRAALLDIFETIDLDGNGL
LSLEEYNFFELRTSGETCDEEVWAICKENFDMKKNELTRQGFMDLNLMEANDREGDPSDL
WVTLLSLGYNKALEMTEACPFVIDIYAEKCKPRIKAIYLEAGSWQLNRAICKSVVNNGDA
KVMDGCENIIVYTCRTGMRITSVIENKSDNKVIVHVNNEQSKNCLSNRGLAVFAVEVAPK
SMMVSQHVLPLNEQEEWLYNCVHSLLR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagccctgggagtaatgcagccctcgatcagaaaggcacagactcggaaggc
tctcaagcaaagcagtctcagcatgcagaagaagccatcttttacaagaactgtcgagca
gcttacctgaccattttcaaaagcagtttagaaaatattaaatcgaaagaacaactcact
ttggttcttcaacaggctggaagaaacccatctcagaagacagttaataaatactggact
tcacaaacaaccacgctgaattttgatgatttttgtactattttaaaagaagaaacacca
tctgcaaaaactgaattgcttgaagcatttgggaaaatagacacagataacactggttat
attttacacgatgaactttatcaacttctgacaacagaaggtgaaaaaatgactttggat
gaagtgaacgcagtaattaaattacctgattttaactgcaatggcaaactggattacaag
aagttttgtgacttatttgtggcgaccagtgagcagtgctgcaggactgcactagagaaa
ctggaggctgatggtcgattgaggcatcggcagtttggaagtgaagctgaagcttcccct
gcagggctcacagtgccagtatcaaaaccatcactgaaaatctcgaggaaagctgaccac
aaaccagcaccaaccaaaggcgatagcagaactccttcaagaccagctcaaagctgcaga
gcatccagttcttccaccatcagcgtgtgtgccagtagcaacagaagcacaaacctactt
gagcccaacacgatgaaggaatggcaatgtgctcaatccaagggatgcttctacctagag
gaggatggtgaaatcgttgctcataagtacaggctgcatttacctcagaggtctgcagtg
tgcataactatcaagcctttacgccttcgtcaaatagaaggaaaatcttgtcgctggttg
tcagtggatacggtgttgtatgttctgaaggaaaatgaaaccacagaaaatctgcagctt
gtctgctctactgaccagcaaaacagagagatgtttggatggaaaggggagcttccatca
ggagtgtactggctactcccattcacaacaggctgtaggctgaaaaaggcaaaaacacca
attactggagaagcaaaactggtgtatagagatgaagatggtgaactggctcttaccaaa
gagttccgagcagctttattggatatatttgaaacaattgatttggatggaaatggcctt
ctgagtttggaggaatacaatttctttgaactgagaactagtggtgaaacatgtgatgag
gaagtgtgggctatatgtaaggagaattttgatatgaagaagaatgaactaacaagacaa
ggatttatggatctgaatctcatggaagccaatgaccgtgaaggggatcctagtgacctt
tgggtcactttattgtcactgggctacaacaaagcattagaaatgacagaggcatgcccc
tttgtcattgacatctatgcagaaaaatgcaaacccagaattaaagccatatatctagag
gcaggcagctggcaactcaacagggctatctgcaagtctgttgttaataatggagatgcc
aaagtaatggatggctgtgaaaacataattgtctatacctgtaggactggcatgcgaatc
acttctgttattgaaaataagtctgataacaaagtgattgttcatgtcaacaatgagcag
agtaagaactgcctaagtaatagaggccttgctgtttttgctgtggaagtggcaccaaaa
tctatgatggtttctcagcacgtgctgccactgaacgagcaggaagaatggctgtataat
tgtgtgcattccctcttacgctga
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