Lagopus muta (rock ptarmigan): 125693185
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Entry
125693185 CDS
T09141
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125693185 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125693185 (RPAP2)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125693185 (RPAP2)
Protein phosphatases and associated proteins [BR:
lmut01009
]
HAD phosphatases
Fcp/Scp phosphatases
125693185 (RPAP2)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125693185 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
125693185
NCBI-ProteinID:
XP_048800699
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Position
5:15735821..15770644
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AA seq
626 aa
AA seq
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MADGKLQGSAKGRPGRRRAGNKRSAAPKNEDAAQRKAALEASTRKKIELEKKALHIVEQL
LEENITEEFLLNSGKCITPSHYKDIVDERSIIKLCGYPVCRNKLENVPKQKYRISTKTNR
VYDITERKCFCSNFCYKASKYFEAQISKSPVWMREEEIPSDIELLKRGQSGQSGEEVKLC
DEVIKASDIENPRVSSNPCESASYGTASDSSSDTEQEFVSSVLPGSQSSSVNLAQQLHRN
SILKKKHLQKAYSSSKSEGSNVVEITERLSNCKLNAQEEMHACTVQEKITAMPSKNTTPG
KSNASENCEDTCSNSQIVFLGVSKKGAEYLKTLANSKQHEKIELRDSVSSSAAKCSLLEL
LKQTLTEWRTEETLRFLYGPNYTLWSSECLSSANQEDEELDEDDLDTPEDLDSAAVGKFE
NSLNYSLPFMGSGETVKPVPSYEELKEETEFLQLRVREFYKGKYTLAEEELAHTQADEHS
STDKNDQQEDPTFPLVDSNAQMQIRKRIVLEKLRRALPAVLGPLQIMLGDVYTELKNLVK
TFRLTNRNIIHKMPEWTLIAIVLLSVLSQNIPVFKNTQRSPAYTQFLTTLLEELHFKNED
LESLTRIFRVNSPPEWSVNFKLFCIS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggaagctgcagggcagcgcgaaggggaggcccggccggcggcgcgcagga
aataaacggtcagctgctccaaaaaatgaagatgctgctcagaggaaagcagcgctggag
gcttctactagaaaaaagattgaacttgagaaaaaggcactgcatattgttgagcaactc
ctagaagagaacattactgaagagttccttctgaattctggaaaatgtattactccatct
cactataaggacattgttgatgaacggtctatcatcaaactatgtggttaccctgtatgt
cgaaataaactggaaaatgtgccaaaacagaagtacaggatttcaacaaaaactaacaga
gtttacgatattactgaaagaaagtgcttttgcagcaacttttgctataaagcatctaaa
tattttgaagctcaaatttcgaagagtccagtatggatgcgagaagaagaaataccatca
gacatagagctgctgaagaggggacagagtggtcaatctggagaagaggtgaaactatgt
gatgaagtaatcaaagcttctgacattgaaaatcctagggtatcttcaaatccatgtgaa
tctgcttcttatggcacagccagtgatagcagtagtgataccgaacaggaatttgtttct
tctgttctaccaggaagtcagtcaagttcagtcaatcttgcacagcaactgcacagaaac
agcatcctcaaaaagaagcaccttcagaaagcttattccagctctaaatctgaaggctca
aatgtggtagaaatcactgaacgactctctaactgtaaattaaatgctcaggaagaaatg
catgcttgcactgttcaagagaaaataactgcaatgccctcaaaaaatactactccagga
aaatcaaatgcttctgagaactgtgaagatacctgtagcaattcacagatagtcttccta
ggtgtgagtaaaaaaggagcagaataccttaaaacactagctaactcaaaacaacatgaa
aaaattgaactgagggattcagtttcttcctcagctgccaaatgcagtttattagaactg
cttaagcaaacacttacagaatggagaactgaggaaaccttaagatttttgtatggtcca
aactacactttatggtcatcagaatgcctatcgtctgccaaccaagaagatgaagaactc
gatgaggatgacttagatacacccgaagatcttgacagtgctgctgtagggaagtttgaa
aacagtctgaactattccttaccttttatgggctcaggtgaaacagttaagcctgtgcct
agttacgaagagttaaaagaagaaacagagttcctacaactccgagtaagagagttctat
aaaggaaagtacaccttggctgaagaggagttagcacatacacaagcagatgaacattca
agtacagacaaaaatgatcaacaggaagaccccacgttcccacttgttgattcaaatgca
caaatgcaaattaggaagcgaattgtcctcgagaaactgagaagagcattacctgcagtt
ttgggccctcttcagattatgctgggggatgtttacacagagctaaaaaatcttgtcaaa
actttccggttaacaaacagaaatattattcacaaaatgcctgaatggactctaattgct
attgttctattatctgtgttgtcacaaaatattccagtttttaaaaatactcagagaagc
ccagcatacacacagttcctgaccacgttacttgaagagctccatttcaaaaatgaagat
ctggaaagtttaacaagaatatttagagtaaacagcccacctgaatggtcagttaatttt
aagctattctgcatttcataa
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