Lagopus muta (rock ptarmigan): 125693241
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Entry
125693241 CDS
T09141
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125693241 (PTBP2)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125693241 (PTBP2)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
125693241
NCBI-ProteinID:
XP_048800844
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Position
5:16900333..16948884
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AA seq
537 aa
AA seq
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MDGIVTDVAVGVKRGSDELLSGSVLNSPNSNMSSMVVTANGNDNKKFKSEDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQATNAPISGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggtgtgaagagaggatctgacgaacttctt
tcaggcagtgtactcaatagcccgaactctaacatgagcagcatggtagttactgctaat
ggtaatgacaacaagaaattcaaaagtgaagataaaatggatggggcgccttctcgtgtt
cttcatatcagaaaactgcctggggaagtgacagaaacagaagttattgctttaggctta
ccttttggtaaggtaaccaacatcttgatgctgaaagggaaaaatcaggcttttttggaa
cttgcaacagaagaagcagctatcactatggttaattactattcagctgtgacgcctcat
cttcgtaaccaacctatctatatccagtattccaatcataaagaactgaagactgataat
acactgaaccagcgggcccaagctgttcttcaggcagtgacagctgtgcaggcaacaaat
gctcccataagtgggaccaccgttagtgagagtgcagttactccagctcaaagtccggtg
cttagaataattattgacaacatgtactatcctgtaaccctggatgttcttcatcagata
ttctctaaatttggtgctgtattgaagataatcacattcacaaagaataaccagtttcaa
gctttactccagtatggggatccagtgaatgcacagcaagcaaaactagccctagatggt
cagaatatttataatgcttgctgtactctacggattgatttttccaaattggtgaattta
aatgtcaagtacaacaatgataaaagcagggactacactcgtcctgatcttccgtctggt
gatggacagccagcgctggaccctgctattgctgcagcatttgcaaaggagacttctctt
ctagggcttcctgttgcagctgttccaggagctctgagtcctctggctattccaaatgct
gctgctgcagctgcagctgctgctgctggccgtgtgggaatgcctggagtctcagctggt
ggcaatacagttctcttggttagcaatttaaacgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttatacaataagaaa
gacagtgctcttatacagatggctgatggaaaccagtcgcagctggctatgagccatctt
aatggacaaaaaatgtatgggaagataattcgtgttaccctttctaaacatcaaacagtt
caactacctcgagagggtcttgatgatcaagggctgactaaagattttggtaattcacct
ctgcatcgtttcaagaaacctggttcaaaaaactttcagaatatattccctccgtctgca
acgcttcatctatccaatattccaccgtcagtagcagaagaggatttacgcacactgttt
gctaacactggaggcactgtgaaagcatttaaattttttcaaagagatcacaagatggca
cttcttcagatgtcaacagtagaggaagctattcaggctttgattgatcttcacaattac
aatcttggagaaaatcaccacctgagagtttctttctctaagtcaactatttaa
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