Lagopus muta (rock ptarmigan): 125693319
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Entry
125693319 CDS
T09141
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04080
Neuroactive ligand-receptor interaction
lmut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125693319
04082 Neuroactive ligand signaling
125693319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125693319
Ion channels [BR:
lmut04040
]
Ligand-gated channels
GABA-A
125693319
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125693319
NCBI-ProteinID:
XP_048801034
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Position
5:complement(52413703..52450248)
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AA seq
481 aa
AA seq
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MVWYFILKSTLICQGCTHSQLETALAKLKELQELLKLDLTMRSLKCCSLDAFFLLVLCRS
VQVSEAEGKGEILPPTIQNIIKGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTA
TIFLRQRWTDERLCFDGNKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYP
NGTVLYAIRITTTVACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDT
LQLAQYTVEDHFTSVSEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSF
WISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEY
AVAHFCTLHRPSSKEIPKDEDEGTEEERNGVLAAVANSCSASDTTNKIDSDKGSKTSING
KKERNKHSGCSSPMSIMKSLFCIFDCFHVKNPYHIDNYARFSFPLSFIIINVFYWVYYLY
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtttggtatttcatcttgaagagtacattgatatgccagggatgcactcactcacaa
ttggaaacagcactggcaaaactcaaggagctgcaagaacttttgaagctggacctgaca
atgcgcagtctgaaatgctgcagcttagatgcattttttcttttggtgctgtgtaggtct
gtgcaggtttctgaagctgaaggaaaaggtgaaattcttcccccaaccatacaaaatata
ataaaaggatacaacaaatatctacgtccattttttgacaatggtcctgtgtctgttgga
atgagtctggatattgcaagcattgataccatatcagaaataaatatggattacacagca
accatatttctgaggcagcggtggactgatgagaggctttgttttgatggcaataagagt
ttaagtttagatggtcggcttgtggaaatgctctgggtcccagatactttcatagttgat
tcaaagaagtcttttcttcatgatatcactgttgagaatcgtctgataagaatataccct
aatggaacagtcttgtatgctataaggattaccacaactgttgcatgcagcatggacctg
accaaatacccaatggataagcagacgtgtaccttgcaactggaaagctggggttacaat
atcaacgatgtcatgttttactggactagaggaaatgattctgttcgtggattggacaca
ctccagctggcacaatacacagtggaagaccactttacttcagtatctgaagcagtatat
gaaacaggacgctaccccaagttagtgtttcactttgagctcaaaagaaacatcttgtat
ttcatactagagacatacgtaccatcaattctcctggttgtgctctcctgggtgtcattt
tggataagccagtcatccgttccagccagaatctgcataggtgttaccacagtcctcact
atgacaacgctgatgatgggagccaggacttcactcccaaatgctaactgctttattaag
gcaattgatgtgtaccttggcatctgcttcagtttcatcttcggagcattgttagagtat
gctgtggctcatttctgcaccctgcatcgacccagttcaaaggaaattccaaaggatgag
gatgaagggactgaagaagaaaggaatggagttctggcagcagttgctaacagttgcagt
gcttctgacaccacgaacaaaattgattcagacaagggcagcaaaaccagcatcaatggc
aaaaaggagagaaataagcacagtgggtgtagctcgccaatgtccataatgaaaagtctt
ttctgtatctttgattgtttccatgttaaaaatccttaccacatagacaactacgccaga
ttttcttttccattatcattcatcataattaatgtattttattgggtatattatttgtat
ttctaa
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