Lagopus muta (rock ptarmigan): 125693356
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Entry
125693356 CDS
T09141
Name
(RefSeq) vitellogenin-1 isoform X1
Organism
lmut
Lagopus muta (rock ptarmigan)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
125693356
NCBI-ProteinID:
XP_048801109
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All DBs
Position
5:complement(11357564..11429385)
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AA seq
1921 aa
AA seq
DB search
MEENCCTETLRIFGGSQHLNYQPDFGENKVYIYNHESILLSGIPEKGLARAGIRIRSKVE
ISGIGPKLCLIRIHSIEAAEYNGIWPTSSFSRSLKLTQALTGQLSNPIKFEYSNGHIGNL
MAPDSVSDDGLNIYRGILNMLELSMKKMQHSYSLQEAGIGGICNTTYAIQENKKANLVYV
TKSKDLNSCEEKVQVVIGSAYTQPCQTCQQRNKNSRATATYNYKIKYTRNEAVITQANVE
EIHQFAPFNEITGGNAMIEARQKLVLIDVQKQVAEVPPKEFQKRGSLQYQFGSELLQLPV
HLFKIQDVGSQIEESLQDLVETTYEQLPSDAPAKALKLMHLFRAANEENYESIWKQFSSR
PAYRRYILDLLPAAGSHRSLRFLRHKVERQELTNWEMAQTVLMAFHSSSPTQDVMEEATL
IVKKYCPRSSSVLGKVCHLSYASLCHKQCSSSDSCSECLQLLHGFAGEALSKSNTEEILL
ALKALGNVGHPASIKHIKKFLPGYAAGASDLPLKVHATAVMALKNIGMKDPKMVQAITLE
IFLNHKIHPRIRMLAAVVLLETKPGLPILMTLADAVLKDPSMQVASFIYSHLRALGRSTA
PDLQMMASACRMAVRALSPKFDRSGYQFSKVFRFSMFKEFLMSGLAAKYLVLNNAGSLIP
TMAVSQLRTHFLGRVADPIEVGIAAEGLQEMFVRGYSPDKDWETNYDFREILKKLSDWKA
LPSDKPFASGYLKMFGQELFFGELDKNSIQNVLQAWYGPDEKIPSIRRLISSLQSGIGRQ
WTKALLSSEIRRIVPTCTGFPMETSFYYSSVTKVAGNVQVQITPSPRSDFRLTELLNSNI
RLRSKTSLSMAKHMTFVIGINTNMIQAGLEAHTKVNAHVPVNVVATVQMKERSIKAEIPP
CKEETNLITVSSRTFAVTRNIEDLAASKMTPVLLPEAVPDIMKMSFDSDSASGETDNIRD
RQSVEDVSSGNSFSFGRSSWKEPFVQSMCSNASTFGVQVCIEKKSVHAAFIKNVPLYYLI
GEHALRVSFKPVYTDVPIEKIQVTIQAGDQAPTKMVRLVTFEDPETQVSSSKEVIKRVKK
ILDDTDNQATRNSRSSSSSASSISESTESTTSTPSSSDSDNRASQENTQINLKSRRSKAK
EKKFYPFGDSGSSSSSSSSSSSSSSSSSDSSSSSSSSSSSSSDSSSSSSSSSSSSSSSSS
SSSSKSKSSSRRSKTNSGSSSSSSSNSKGSSSSSRSKSNSKGSSSSSKSSGTRRNAKKQS
KTTSFPHASTAEGERSVREQKQKTQSSSSSSRRASSNSRSTSSSSESSGVSHRQWKQDRQ
AETKRVKSQFNSHSSYDISNEWETYLPKVYRLRFRSAHTHWHSGHRTSSSSSSSSSEYGS
SHSNSSSSDSSSRKSHMSSSSSSSSSHRHGEKAAHSSRRNPVSRGATTHHRHESSLTHER
NFLGDIIPPGITIVAQAVRSDNRNQGYQATAYVRSDAAKVDVQLVVVQLAETNWKACADA
VILPLKAQVRMRWGKECRDYRIAALATTGQLARKPAMQLKVQWGNVPSWIKKTSTVFMQY
VPGAALVLGFSEAHQKNPSRELILRAAATSPRTIDTVIKVPGVTLYYQGLRVPFTLPLGP
SSSSYETRDITAWNFLPEIASQIAQEDQSTCEVSEGDFKTFDHMSFTCSFNKSCNVIVAQ
DCTEYPKFIITTRKVDDQSLSREVHINTSSANITICPAADSSLLVTCNKESVLSGSGVSE
YEKDNIKIYKNGTRVIVEAPTHGLKNVNFDGEILKVTVTSWMRGKTCGICGNNDREKHNE
LLMPNHKQAHSCSAFVHSWVLLEETCSGGCKLQRSYVKLNRNPTIDGEESTCYSVDPVLK
CMKDCTPIEKTSVKVGFHCFPKDTAVSLLEWQRSSDKKSASEDVVESVDSDIDCTCTGDC
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaactgctgcacagaaactctcaggatttttggagggagccagcatcttaat
taccaacctgattttggtgaaaataaggtttatatatacaatcatgaaagcatacttctc
agtggaattccagagaaaggacttgcaagagctggaataaggataagaagtaaagtggaa
attagtggtattggaccaaaactttgtcttattaggattcactcaattgaagcagcagag
tacaatggcatctggcctacaagctcattctctcgatcactcaaactgactcaggcactg
acaggacaacttagtaatcccatcaagtttgagtatagcaatggccatattggaaacctt
atggctcctgattctgtctcggatgatggtctgaacatctacagagggattctcaatatg
ctggagctcagtatgaagaagatgcagcattcgtacagtttacaggaggctgggatcgga
ggtatttgtaacacaacgtatgcaattcaggaaaacaagaaagcaaacctagtctatgtg
accaaatccaaggatctgaacagttgtgaagagaaagtccaagtggtcataggttcagca
tacactcagccatgtcagacctgtcagcagagaaacaagaattcccgggcaactgctact
tataattacaaaattaaatacactcgtaatgaagctgtaatcacacaagctaatgtcgag
gaaatccaccagtttgcacctttcaatgagattacaggaggaaatgctatgatagaagca
aggcagaaacttgtattgattgacgtgcaaaagcaagtggcagaagttccaccaaaagaa
ttccagaaacgtggatcacttcagtaccagtttggcagtgaattgcttcagcttcctgtc
cacttattcaaaatacaagatgttggaagccagatagaggaaagcctgcaagatttagta
gagaccacatatgaacagcttcccagtgatgcaccagcaaaagccctcaagcttatgcac
ctcttccgtgctgcaaatgaggagaattatgagtcaatatggaaacaattctcaagtcgg
ccagcgtacaggcgctacattttggatttacttcctgcagcaggcagtcaccgttcactg
agattcttgaggcataaagtggaaaggcaagagctcaccaactgggaaatggctcagaca
gtgcttatggctttccactcaagttcacctactcaagatgtgatggaagaagctacactc
attgtgaaaaaatattgtccacgctcaagtagtgtactcggaaaggtttgccacctcagc
tatgcatcactgtgccacaaacagtgctcttcatcagactcctgctctgaatgtctccag
ctactccatggctttgcaggagaggcattgagcaaatctaacacagaagaaatcttgctg
gccttgaaagcccttggaaatgtaggacatccagccagcatcaagcacatcaagaaattt
ttgcccggctatgcagctggtgcctcagatctgcccctcaaggtccatgcaactgctgtg
atggccctgaaaaacataggcatgaaagacccaaaaatggtccaggctattacccttgag
attttcctgaatcacaaaattcatcctcgaatccgaatgttagctgcagtggttttgctt
gaaactaagccaggtcttccaatcctgatgacattagctgatgctgtgctgaaggatcct
agcatgcaagtggcaagtttcatttactctcacctgagggccctgggcagaagcacagct
ccagatcttcaaatgatggcttctgcctgcagaatggctgtcagagcattaagtcccaaa
tttgacagatctggataccagttcagcaaagttttccgcttcagtatgtttaaagagttc
cttatgagtggactggcagctaaatatttggtactgaataatgcaggaagcttaattcca
acaatggcagtgtcccagctgcggacacatttccttggaagagttgctgatcccatagag
gtgggaatagcagctgaaggacttcaggagatgtttgttagaggttactctcctgacaag
gactgggagactaactatgacttcagggaaatcctaaaaaagctatcggactggaaggca
ctccccagtgacaaaccctttgcatcaggttacttgaagatgtttggccaagagttgttc
tttggtgaactcgataaaaacagcatccaaaatgtattgcaggcatggtatggacctgat
gaaaaaatcccttcaataaggagattaatcagtagccttcaaagtggcataggaaggcaa
tggaccaaggctttactatcctctgagattcgtcgtatcgtgcctacctgtactggattc
ccaatggagaccagcttctattattcttctgtcacaaaagtggcaggaaatgttcaagtg
caaattacaccttctccaaggtctgatttcagactgactgagttactaaattccaacatt
aggctgcgttccaaaacgagtctgagcatggctaaacatatgacctttgtaattgggatc
aacacaaacatgatccaggcagggttggaagcacacaccaaggtaaatgctcatgtacct
gtgaatgttgttgccactgtccaaatgaaggaaagaagtatcaaagctgaaattccacca
tgcaaagaagagactaatttaattactgtaagctctaggacatttgctgttacacgaaat
attgaagatttggctgctagtaagatgactccagttcttctacctgaagcagtgcctgac
ataatgaagatgtccttcgactcagattctgcatcaggcgagactgataacatcagggac
agacagtctgttgaagatgtttcatcaggaaattccttctcctttggacgttcttcctgg
aaagagccatttgttcaatccatgtgctccaatgcaagtacatttggggttcaagtctgc
attgagaagaaaagtgtacatgcagcatttataaaaaatgtgcctctttattaccttatt
ggagaacatgcccttagagtgagcttcaagccagtctacacagatgtacctattgaaaaa
atacaagtaacaattcaagcgggagatcaagctcctacaaaaatggtacgtttagtgaca
tttgaagatccagagacacaagtatcttccagcaaagaagtgatcaaaagagtgaagaaa
atccttgatgacaccgataaccaggcaacaagaaactccagaagctcctcatccagtgcc
agcagcatcagtgagagcactgagagtacaacgagcaccccctccagcagtgactctgac
aacagagcatcacaagaaaacacccagattaatctgaaatcaaggcgatccaaagccaaa
gagaagaaattctacccatttggggacagcggtagcagtagtagcagtagtagcagcagt
agtagtagcagtagtagcagcagtgatagtagcagtagtagtagcagtagcagtagtagc
agcagtgatagtagcagcagtagtagtagtagcagcagtagtagcagcagcagtagtagt
agcagcagcagcaagagcaaaagcagtagcagaaggagcaaaaccaatagtggcagcagc
agtagcagcagtagcaatagcaagggcagcagcagcagcagtcgtagcaaaagcaacagt
aagggcagcagcagcagtagcaaatcatctggtacaaggcggaatgctaagaagcagtcc
aagaccacatcatttccacatgccagcacggctgaaggagaaagaagtgtccgtgagcag
aaacagaaaacacagagtagcagcagtagcagcagaagagccagcagcaacagcaggagt
accagcagcagcagtgaaagctctggtgtttcccatcgccagtggaaacaggacagacaa
gctgagactaagcgtgtcaagtctcagtttaacagtcacagtagttacgacatttctaat
gaatgggaaacatacctgccaaaagtataccggctccgcttcaggtctgctcacacgcac
tggcattcaggccacaggacatcaagcagctcatcgtcatcttcctctgagtatggaagc
agccacagcaacagcagcagcagtgacagcagcagcaggaaaagccatatgagcagctcc
agtagcagtagcagcagtcaccgtcatggggaaaaagctgcccacagctcaaggagaaac
cctgtgagcagaggagccaccactcatcacagacatgaatccagcctgacacacgagcgc
aacttcctgggagacataattccacctggcattacgattgtggcacaggcagtaagaagt
gacaacagaaatcaaggttatcaagctacagcatatgttcgttccgatgctgccaaagtt
gatgtgcaactagttgtggttcagctggctgaaaccaattggaaagcatgtgctgatgct
gtaatactgcctctgaaagcacaggttagaatgagatggggcaaggagtgccgagactac
aggatagcagccttggctaccacaggccaactggcgaggaagccagccatgcagctgaag
gtacaatggggaaatgttccttcctggataaaaaagacgagcacagtattcatgcagtat
gttcccggtgcggcacttgttttgggcttctcagaggcacatcagaaaaacccgtctcgt
gaacttatcctacgggcagctgcaacatctccacgaacaattgatacagtaattaaagtt
cctggggtaacgctttactatcagggactccgagtgccattcactttgcccttagggcca
tcatcttcatcatatgagactagagatatcactgcctggaatttccttcctgaaatagct
tcacaaatagcacaagaagatcaatccacatgtgaagtcagcgagggagatttcaaaaca
tttgatcacatgagctttacgtgttctttcaataaaagctgcaatgtgatagtggcccaa
gactgtactgaatatccaaaattcatcattaccacaagaaaagttgatgaccagtctctg
tcaagagaggttcacataaatacaagttcagcgaacatcacaatctgtcctgcagcagat
tcgtctctgcttgtgacatgcaataaggaatcagtactatcaggcagtggagtttctgag
tatgaaaaagacaatattaaaatttataaaaatggaacaagagttattgtggaagcacca
acacatggactgaagaatgtgaattttgatggtgagatccttaaggttaccgttacttca
tggatgagaggaaagacctgtggaatctgtggaaataatgacagagaaaagcacaatgaa
ctcctaatgccaaatcataagcaggcacacagctgttccgcttttgttcattcatgggta
ttgctagaagaaacctgctctggtgggtgcaaactgcagcgcagttatgtgaagctgaat
cgaaatcctactattgatggagaggaatctacatgctattctgttgacccagtactgaaa
tgtatgaaagactgtactccaatcgaaaaaacttctgttaaggttggcttccactgtttc
ccaaaagatactgctgtaagcctgttggaatggcagagaagcagcgataagaaatctgca
tctgaggatgttgtggagtctgtggattctgacattgattgtacctgcactggtgactgt
agttaa
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