Lagopus muta (rock ptarmigan): 125693360
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Entry
125693360 CDS
T09141
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125693360 (FUBP1)
03041 Spliceosome [BR:
lmut03041
]
125693360 (FUBP1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125693360 (FUBP1)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125693360 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
125693360
NCBI-ProteinID:
XP_048801122
LinkDB
All DBs
Position
5:complement(11116816..11152745)
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AA seq
704 aa
AA seq
DB search
MKSRPSPPQAASGAGSGGGASMADYSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQI
AAKIGGDAGTSMNSNDYGYGGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAP
QNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG
GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVI
GKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGF
REVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDR
IAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFN
FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYAR
QLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPH
GPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGG
PATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYY
RQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKKQQTFNHH
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctcgcccttccccgccccaggcagcgagcggggcaggaagcggtggcggagcg
agtatggcggactattccacggtgcctcctcctgcttcaggcgcacccgggggaggcggc
ggtggaggtggaggagtgaacgatgcctttaaagacgcgctgcagagagctaggcagatt
gcagcaaaaattggaggagatgctggtacgtccatgaattccaatgactacggttatgga
ggacaaaaaagacctcttgaggatggagatggctcttggacaagtccgagcagtacaaca
cactgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctcct
cagaatgactcttttggaaatcagttaccaccaatgcaccaacaacaaaggtctgtgatg
acggaggagtacaaagttccagatggaatggttggattcatcattggtagaggtggagag
cagatctcacgcatacagcaagagtcaggatgtaaaatacagattgcacctgacagtggg
ggcctgcctgaaagatcatgcatgctaactggaaccccagaatctgttcaatcagcaaaa
agattacttgatcaaatagttgaaaagggaagacctgcacctggctttcatcatggtgat
ggacctggaaacgcagtccaagaaattatgattccagcaagtaaagcaggactagttatt
ggtaaaggtggagagacaattaagcaattacaggagcgagcaggtgtcaaaatggtcatg
attcaagatggcccacagaacactggtgctgacaagccccttagaataactggagaccct
tataaagttcaacaagccaaggaaatggtgctggagttaattcgtgatcaaggtggcttt
agagaggtgcgcaacgaatacgggtcacgaataggaggaaatgaagggatagacgttcca
ataccacggtttgctgtaggtattgtaattggaagaaatggagagatgataaaaaagata
cagaatgatgctggtgttaggatccaatttaagccagatgatggaacaactcctgataga
atagcccaaatcacagggcctcctgacagatgtcagcatgctgcagaaattattacagat
ctccttcgaagtgttcaggctggtaaccctggtggcccaggaggacctggtggtagagga
aggggtagaggtcaaggcaactggaacatggggccccctggtggattacaggaattcaat
ttcattgttcccactggcaaaactggattaatcattggcaaaggtggtgaaactattaaa
agcataagccagcagtctggtgctagaatagaacttcaaagaaatcctcctcctaatgca
gatccaaacatgaagatgtttactatccgtggaacaccccagcaaatagattatgcacgg
caacttatagaagaaaagattggaggtcccgtaaatccattgggtccacctgttccccat
ggaccccatggtgttgttcctggccctcatggacctcctgggccaccaggccctggtgct
cccatgggaccatataacccagctccttataatccagggcctcctggcccagcacctcat
ggtcctccagctccgtatgctccacaaggatggggaaatgcttatccgcactggcagcca
ccaaacccaccagatccaggtaagccaggaacagatcctaattcagcagcatgggcagct
tattatgctcactattatcagcagcaagcacagccaccacctgcagcccctcctggtgga
ccagcgacaacccaaaccaatggacaaggagatcagccaaacccagcaccagcagggcag
gttgactatacaaaggcatgggaggaatactacaaaaaaatgggtcaagcagttcctgcg
cctgctggagctccgccaggtggtcagccggattacagcgcagcatgggctgagtactac
aggcagcaggcagcatattatgcccagacaagtccccagggaatgccacaacatcctcca
gcaccacagtgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagaca
tttaatcatcactga
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