Lagopus muta (rock ptarmigan): 125693383
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Entry
125693383 CDS
T09141
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125693383 (MYOF)
Membrane trafficking [BR:
lmut04131
]
Endosome - Lysosome transport
Others
Ferlins
125693383 (MYOF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
NagJ_C
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
125693383
NCBI-ProteinID:
XP_048801214
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All DBs
Position
5:50916873..50984811
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AA seq
2060 aa
AA seq
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MLRVIVESASNIPKTKFGKPDPIVSVVFKDEKKKTKKIDSELNPVWNEILEFDLKGIPLD
NSSSLAAIVKDFETIGQNKLIGSASIALKDLVGNQSRSCPFKLIPLLNERGQETGATIDL
VVGYEPPAGPANPNDPGGTNSQEADGEDDGDCEDVVDGAVAGITPTVPSGTRESQLARRI
TKGKKTRRILSNKPQDFQIRVRVIEGRQLPGNNIKPVVKVHVCGQTHRTRIKRGNNPYFD
EIFFYNVHMTPLELLDETISIRVYDSYSLRADCLMGEFKIDIGYIYDEPGHAVMRKWLLL
SDPEDTSSGAKGYMKVSMFVLGTGDEPPVEKRERDNESDDVESNLLLPAGIALRWVTFLL
KIYRAEDIPQMDDAFAQTVKEIFGGEADKKNLVDPFVEVSFAGKKVCTNIIEKNANPEWN
QIIYLQVKFPSMCEKIKLAIVDWDRLTKNDVVGTTYLSLSKIASSGGEVEELSSSGTGSS
SYEVNTGETEVGFLPTFGPCYLNFYGSPREYTGFPDPYDELNFGKGEGVAYRGRILVELS
TVLESKPVNKKLDMIPNDDILVVEKYQRRRKFCLAAVFHSATMLQDTGEPIQFEVSIGNY
GNKFDTTCKPLASTTQYSRAVFDGNYYYYLPWANTKPVVTLTSFWEDISHRLDPVNVILN
VVERLQSNLTNLKSGMQAKISENRLAEMWLKLIDELTDDISKPFPLIEGKSNITVLDTQI
EKLRLRSLKQIGEAATRMRNEATDVKTTLTEIEDWLDKLMQLSEEPQNSMPDVIIWMIRG
EKRLAYARVPAHQVLYSTTSPESSGKYCGKTQTIFLKYPQDKTKDVKMPVELRVNIWLGL
SAVEKKFNSFAEGTFSVFAEMYENQALLFGKWGTSGLVGRHKFSDVTGKIKLKREYFLPP
KGWEWEGEWMVDPERSLLTEADAGHTEFTDEVYENESRYPGGEWKAAEESFTDVNGEKAP
PPREFTCPVGWMWEDDAWKSDLNRAVDEHGWEYGITIPPDTKPKSWVAAEKMYHTHRRRR
LVRKRRRDSAQAVTTGRGMSSYEDQEGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPS
ETHGAAAIFKLEGALGADTSTDDGEGKGSDKTKDSATKVFGANTPLVSCYFDRVYTYHLR
CYVYQARNLMALDKDSFSDPYAHVSFLHQSKTTEIIHSTLNPTWDQTLIFNEIEIYGDPQ
TVAQNPPNVVIELFDSDQVGKDEFLGRSVCAPMVKLIPEEDITPKLLWYPVTNNGKASGD
ILFAAELILRDKSGSNLPILPSQRAPKLYMVPQGIRPVVQLTAVEILAWGLRNMKNYQLA
PVTSPSLIVECGGEMVESVVIKNLKKTPNFPSSVLFMKVLLPKEELYAPSLVIKVIDHRP
FGRKPIVGQCTIDLLESFRCDPYATKEDIAPQLKVSLLSAAPRRDTVIEMEDTQPLLAAQ
QLTEKEEEIVDWWSKFYASIGEHEKCGQYITKGYDTLKVYDCELEKVPEFNNLTDFCDTF
KLYRGKAEDSDDPSVVGEFKGSFKIYALPDDPTTPAPPRQFCQLPDSGPQECIVRIYIVR
ALQLQPQDNNGLCDPYIKITLSKKVIEDRDNYVPNTLNPIFGRMYELSCFLPQEKDLKIS
VYDYDTLTRDEKVGETIIDLENRFLSRYGSHCGIPQQYCTSGVNTWRDQLKPTQLLQNIA
RFKGYAPPVFSENGRRITYGGRDYTLEEVEANKVLHQHLGPGEERLALHILRTQGLVPEH
VETRTLYSTFQPNIPQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYVLRVIVWNTKDVL
LDEKSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLC
IVSKKEHFWSLDKTEFRIPPKLIIQIWDNDKFSLDDYLGFVELDLHKTIIPAKVPEKCNI
DMIPEYKADGSQKASMTASLFEQKSMKGWWPCCVEKDGSRILAGKVEMTLEVVNEKEAEE
RPAGKGRDEPNMNPKLDLPNRPDTSFLWFTNPCKTMKFIVWRRFKWLFIGLIILLIILLF
VAVLLYSLPNYLSMKMVKPI
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggtgatcgtagaatctgcgtccaatatccccaaaaccaagtttgggaagcca
gatccgatcgtttccgttgtttttaaagatgaaaaaaagaaaacaaagaaaattgacagt
gaactcaatcctgtttggaatgagattcttgaatttgacttgaaaggaatccctctggat
aattcatcttccctggcagctattgtgaaggattttgaaaccattggacaaaacaagtta
attggcagtgcatccatagcgcttaaggatcttgttggtaaccaaagcagatcatgccct
ttcaaactcatacctctgctaaatgaaaggggacaagaaactggagcaacaatagatttg
gtagtaggatatgagccaccagctggacctgcaaatccaaatgacccaggagggaccaat
tcacaagaagcagatggagaagatgatggagattgtgaagatgttgtggatggtgctgtt
gctggcatcacaccaacagttccaagtggcacaagggaatcgcagctagctagacgcatc
accaagggaaagaaaacacggagaatcctttctaacaaaccacaagattttcagattcgc
gttagagtcatcgaaggccgtcagttacctggaaataacataaaaccagtcgtcaaagtt
catgtttgtggtcagacacaccgaacgagaatcaaaagaggaaacaacccttattttgat
gaaatattcttctacaatgtccacatgactcctttagagctgcttgatgaaacaattagc
attcgggtgtatgattcttactcccttcgagcagactgtctaatgggtgaatttaagatt
gacattggctatatctatgatgaacctggccatgcagtgatgagaaaatggcttttgctg
agtgatcctgaggatacaagttcaggagctaaaggctatatgaaagtcagcatgtttgtc
ctgggaactggagatgagccaccagttgaaaaaagggaaagagataatgaaagcgatgat
gtggagagcaatctgttacttccagctggaattgcacttcgatgggtcactttccttctc
aaaatctacagagctgaggacattccacaaatggatgatgcttttgcacagactgtcaag
gaaatatttggaggagaagcagacaagaaaaatctggtagatccctttgtggaagtttct
tttgctggaaaaaaggtttgcacaaacataattgagaaaaatgctaatccagaatggaac
caaattatttatcttcaagtcaagtttccctcaatgtgtgagaaaataaagcttgcaatt
gttgactgggatcgtcttaccaaaaatgatgtagtaggaacaacatatttaagtctctca
aaaattgcttcttctggaggggaagttgaagaactttcatcttcgggaactgggtcttca
tcatatgaagtcaacactggagaaacagaagttggctttttaccaacatttggcccctgt
tacttaaatttctacggaagtccaagagaatacacaggattcccagatccatatgacgaa
ttaaactttggaaagggagaaggagttgcttatagagggagaattctggttgaactatct
acagtgcttgaaagcaaacctgttaataaaaagttagatatgattcctaatgatgacata
ctggttgttgaaaaataccagcgcagacgaaagttttgcttggctgctgtgtttcattct
gctaccatgctgcaagacactggtgagcctatccagtttgaagttagcatcggtaactat
ggcaataagtttgataccacctgtaaacctttggcatcgacaactcagtacagtcgtgct
gtttttgatggtaattattattactatctgccatgggcaaacacaaagccagtggtaaca
ctgacttctttttgggaggacataagtcatagattagaccctgtgaatgtaatcctgaat
gtggttgaaagactgcaatccaacttaaccaacttaaaatcaggaatgcaggctaaaatt
tctgaaaacagattagctgagatgtggttgaagctgattgacgaacttacagatgatata
agtaaaccatttcccctcatagaaggcaaatctaatattacagtccttgacactcagata
gaaaagctgcgcttaaggtctctcaaacagattggagaagcagcaacaaggatgaggaat
gaagctactgatgtgaaaaccactttgacagaaattgaggattggttggataaattaatg
caactaagtgaagagccacaaaacagtatgcctgatgtaatcatatggatgatccgaggg
gagaaaagactggcttatgctcgtgttcctgcacaccaagtgctgtattccaccacaagc
cctgaatcatctggtaaatactgtggaaaaacacaaacaatcttcttaaagtacccacag
gacaagacgaaagatgtcaaaatgcctgtggagttgcgagttaacatttggcttgggctc
agtgcagttgaaaagaagttcaatagttttgcagagggaacgttcagtgtttttgcagaa
atgtatgaaaatcaggctcttctttttggaaagtggggtacctcaggtcttgttggtcgc
cacaagttttctgatgtcacaggaaaaatcaaactgaagagagagtattttctaccccca
aaaggctgggagtgggaaggagaatggatggttgaccctgaaagaagtttgttgactgaa
gctgatgctggtcataccgagtttaccgatgaagtgtatgagaatgagagccgctatcct
gggggagaatggaaagctgctgaagagagtttcacagatgtgaatggagaaaaagctcca
ccgccacgtgagttcacatgtcctgttggatggatgtgggaagatgatgcttggaagtca
gatttaaatagagcagtagatgagcatggatgggaatatggaattactattcctccagac
actaaaccaaagtcatgggttgctgcagagaaaatgtatcatacacaccgacgaagaaga
ctggtgcggaagcgtaggagggattcagctcaggcagtaacaacgggaaggggaatgtca
tcgtatgaagatcaagaaggatgggaatatgcttccttgattggttggaaatttcactgg
aaacaacgcagttctgacactttccgtcgaagacgatggagacgaaaaatggctccctca
gagacacatggtgctgcagctatctttaaacttgaaggtgctttgggggcagacactagt
accgatgatggagaagggaagggttcagacaaaaccaaggactcagccacaaaggtgttt
ggtgccaatacaccacttgtttcctgctactttgacagggtgtatacttaccacctgcgc
tgttatgtataccaggcaagaaatctcatggctttagacaaagacagcttttcagatccg
tacgctcatgtttctttcctccatcaaagcaaaacaactgagatcattcattcaactcta
aatcctacatgggaccaaactctaatatttaatgaaattgaaatctatggggacccacag
acagtagcccaaaatccacctaatgttgttattgaactgtttgacagtgaccaagtgggt
aaagatgaattccttggaagaagtgtttgtgcccccatggtcaagttaatcccagaagaa
gacatcacaccaaaactgctctggtatcctgtaacaaataatggcaaagctagcggagac
attctttttgctgcagaacttattttaagggacaagagtggctccaaccttccaattctt
ccatcacaaagagcgccaaagctttacatggtacctcaaggaatcagaccagtcgttcaa
ctcactgctgttgagattctggcttgggggttgcggaacatgaaaaattaccagctggca
cccgttacatcaccgagtctcatagtggaatgtgggggtgaaatggtggaatctgtggtg
atcaaaaacctcaaaaagacgccaaattttccatcttctgtgctcttcatgaaagtcctt
ttgccaaaagaggagttgtacgccccatctcttgttattaaagtaatagaccacagacca
tttggacggaagcccattgtgggacagtgtactattgatttactggaaagctttcgctgt
gacccctacgctacaaaagaagacattgctccacagctgaaagttagtctactctctgct
gcaccacgccgggatacagtaatagaaatggaggacacgcaaccactgctagcagctcag
cagcttacagaaaaggaggaagaaattgttgattggtggagcaaattttatgcttcaata
ggagaacatgagaaatgtggacagtatattacaaaaggatatgatacattaaaggtgtat
gactgtgaattggaaaaggtaccagaatttaataatctaacagatttctgtgatacgttt
aagctgtacagaggcaaagctgaggacagtgatgatccatcagttgttggggaatttaag
ggatcctttaaaatctatgcattacctgatgatcccactactccagctcctccccgccag
ttctgtcagctaccagacagtgggcctcaggagtgtattgtgcgaatttatatcgttaga
gctttgcagcttcaaccccaggataataatgggctgtgtgatccttatataaaaataacc
ctaagcaaaaaagtaattgaagacagagataattatgtgcctaatactctcaaccccatt
tttggcagaatgtatgaactcagctgcttcttacctcaagaaaaagacctgaaaatttca
gtctatgactatgacacgttgactcgtgatgaaaaagtaggtgaaaccataattgatctt
gagaacagatttctgtcccgttacggatctcactgtggcatcccacagcagtactgcact
tcaggtgtgaatacctggcgtgatcagctgaaaccaacccagttattgcaaaacatagcc
aggtttaaaggctacgctcctcctgtcttctctgaaaatggtagaaggattacctacggt
ggacgagattatactttggaggaagttgaagccaataaagtactacatcagcacctaggt
ccaggtgaagagcggcttgcccttcatattctcagaactcagggtttggtacctgagcat
gtggagacaaggaccttgtatagcaccttccagcccaacatccctcagggaaagcttcag
atgtgggttgatgttttccccaaaagcttaggacctccaggccctccattcaacatcact
ccccgaaaagctaaaaagtatgtcttacgagtgattgtctggaacaccaaagatgtcctt
ctggatgaaaaaagcatcacaggggaagaaatgagcgacatttatgtgaagggatggatg
cctggtaatgaggaaaataagcagaaaacagatgttcactaccgatcactggatggagaa
ggaaacttcaactggagatttgtttttccttttgactatctcccagcagagcaactctgc
atagtttccaaaaaggaacatttttggagccttgacaagacagaattcagaatcccaccc
aaactgatcatccagatatgggataatgacaaattctccctggatgactatcttggtttt
gtggaacttgatttacataaaacaataattccagcaaaagttccagagaagtgcaatata
gacatgattccagaatacaaggcagacggttctcagaaggcttccatgactgcctctctc
tttgagcagaaatccatgaaggggtggtggccatgttgtgttgaaaaggatggctctcgc
attttagcgggtaaagttgaaatgacattggaagttgtcaatgaaaaagaagctgaggag
aggccagctggtaaaggaagagatgaacccaacatgaaccccaaactagatctgccaaac
cgacctgatacttctttcctttggtttacaaacccctgcaagacaatgaaatttattgtg
tggcgcaggtttaaatggctcttcataggccttatcatcctgttgattatactcttgttt
gtagcagtactcctctattcattgccgaactacttgtcaatgaagatggtgaaaccaatt
tga
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