Lagopus muta (rock ptarmigan): 125693410
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Entry
125693410 CDS
T09141
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125693410 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125693410 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lmut02044
]
125693410 (SEC31B)
Membrane trafficking [BR:
lmut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125693410 (SEC31B)
Secretion system [BR:
lmut02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
125693410 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
TPR_Sec16
MIOS_WD40
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF4
Prp18
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125693410
NCBI-ProteinID:
XP_048801297
LinkDB
All DBs
Position
5:47561569..47694510
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AA seq
1218 aa
AA seq
DB search
MKLKEIERTAVEAWSPANNHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQK
GTLPASNRFHKLIWGNFGNGSPESSGVIIGGGENGVLTMYSAHRILASKSDPVIGQTEKH
SGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVI
QIWDLRFATSPLSQLEGHTRGILSVSWCQADPELLLSSAKDNRILCWNPGTGEVVYELPI
RSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNNLDPFGT
GQTLPPLQVPEQVAQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPGQQMQQTY
PHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCKGKIQTAKLKYEENLWKFLKVNLEQ
ESRTKLLKLLGYSKEDLQKKITSCLSNGIPDKQPLLETDDTNAAQSDQLLINSSDDVAAV
SSSSAFFDNLIPQNMSMLEIPVTEDTDGLISQALLLGNFEGAVDLCMRAERFADAIILAI
AGGENLLKETQKRYFAKQKTKLSLLVSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKRE
DYTQLCDMLGSRLELEGDATLSNDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEK
VMVLSRSIEMLRGTAEPMPGPILAEQITQYASLLASQGCLAAAMNYLPNSSKELLIEQLR
DRLFHAQGKNVGDQPPPPFPYTRVNVGVTKHTSPAAQRDSAPEGAAHRTDRRHPEKSNYQ
SSFAPSAPSQPSVPSFFPPQPVPAMSAPHHIVPPQTSTSPQTGVYSRGPPYPQYNVGMVP
ATASGPALSQSQPFSPVGARPVGPAPFPSQPPLSGQSMPMTSPGVLPSGPALLAPASIPS
SQLLAACPLPVASQSPLGFSSAPFSSPVNVGYPQGGPGAPSTKPLPAASLPPPPIGFFPW
LDPHMDHAAQESWTDPSAARGGLQKKKLPEKFAPLAPITAPVMSVPTEPQGIHPQLSRLQ
ESGQSPPGAPKEGSLQYHQLPAERIEKKEVPPEHQGLKTTLEGLVQRCSAVATDPKTRRK
LEDALQRLETLYDKLREQALSPAILMGLHEIARCIEARNYQQGLMVHTQVVSSSSFSEVS
GFMPVLKVLMTIAGKLNV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaggaaattgagagaactgctgtagaagcttggagtcctgcaaacaaccac
cccatttatctagcaacaggaacatctgcccagcaactggatgcatccttcagtacaaat
gccaccttggaaatatttgaggttgacttcagggatccctctctggacatgaagcagaaa
ggaacgcttcctgcctcaaacaggtttcataagctgatctggggtaactttggaaatggg
tccccagaatcctctggagtgatcattggtggaggggaaaatggtgtactgacaatgtac
agtgcacaccggatcttggcttcaaagagtgatcctgtgattgggcagacagagaagcat
tcagggcctgttcgagctcttgacttcaatcctttccagagcaatcttctggcttctgga
gccaatgattctgaaattttcatctgggacttgaataacttcagtgtgcctatgactcca
ggaactaaatcacagcctcatgaagatatcagtgtggtgtcttggaatcggcaggtgcag
catattctgtcctccgctcaccccagtggcaaggcagtggtttgggacctcaggaagaat
gaacctatcatcaaagtcagtgaccacagtaacagaatgcattgctcaggaatggcctgg
cacccagaagttgcaacccagctagttctttcctctgaggatgaccgcttgccagtgatc
caaatatgggacttacgttttgctacctcacctttgagccagctggaaggacatactagg
gggattctgtctgtctcctggtgccaggctgaccctgaattgctgttgagtagcgccaaa
gacaaccggatcttgtgctggaaccccggtacaggggaggtggtttatgagttgcccatt
cgtagtcagtggtgctttgatgtccagtggtgtcctaggaacccttcagtcttctctgct
gccacttttgatggatggattaacatttactctgttatgggtgggaacttagaagcccag
cagaagacacaggctgacaagatctcttcctccttcaacaacctggatccatttggcacg
ggacagacccttcctcctttgcaggtgccagagcaagtagctcaaaccaccttgattcca
ccattaaaaaagccacccaagtggattcgcaggcctgtgggtgtttcatttgcatttgga
ggaaaactgattacctttggtcttaccaaagctcctgggcagcaaatgcagcagacttac
ccccaccaagttttcatcagtcaagtcactactgaaactgagtttttgcttcggtccaga
gaactgcagatggctctgcagtcaggaaacctccttgattactgcaagggcaagatccag
acagccaagttgaagtatgaggagaacctgtggaaattcctaaaggtgaacctggagcag
gaatctagaactaaactcctcaagctgctgggctacagcaaagaagacctgcaaaaaaag
atcacttcatgtttgagtaatggaatcccagataaacagccccttcttgagacagatgat
acaaatgctgcacagtcagatcagcttttgataaattccagtgatgatgtagctgctgtt
tcctcctcttcagccttttttgacaacctcatcccacagaatatgagtatgttggagatt
cctgtcacagaagatactgatggactgatcagccaagctcttttgttgggaaattttgag
ggtgctgtggatctgtgcatgcgggcagagcgatttgctgatgccatcatcttagctata
gctggtggggagaacctcctaaaggagacccagaagcgctactttgccaagcagaagaca
aaactctccctgctagtttcctccattgtgcagcagaattggcaagacattgttcgcacg
tgtgatctacagagctggaaggaggcattggccatcttgttaacatactcaaagcgtgag
gactacactcagctctgtgacatgctgggttcccgcctagagttggagggagatgcaacc
ctgtccaatgatgcctgcctctgttatatctcatcaggcaatgtggagaggttggtggaa
tgctgggtaaaaaaccatgagacttcatcaccccttgccttgcaggatctcatagagaaa
gtgatggtgctgagcaggtccattgagatgctccgaggaacagcagaaccaatgccaggc
cctatcttggcagaacaaatcacccagtatgccagtcttctggcatcacaaggatgcttg
gcagctgcaatgaattacctacccaacagctctaaagagctcctgatcgaacagctccga
gatcggctcttccacgctcaaggaaagaatgtgggagatcagccaccaccacctttcccc
tacactcgtgtcaatgtaggtgtcacaaagcacacatctccagcagcccagagggactcc
gcccctgaaggagcagcacacagaacagatcgcaggcatccagagaagtccaactatcag
tcgtcatttgccccttcagcaccctctcagccttcagtgccttccttcttcccgcctcag
ccagtgccagcaatgtctgcacctcaccatattgtccctccccagaccagcactagtcca
caaacaggtgtctattccagaggaccgccatacccacagtacaatgtgggcatggttcca
gcaacagcttcagggccagctctgtcacaatctcagccattcagccccgtaggagccaga
ccagttggtcctgctcccttccccagccagccgcctctgtcaggacagtccatgcccatg
acatctcctggtgttctcccatctggacctgctctgcttgctccggcctcaatcccatca
tctcagcttcttgcagcctgtcctctaccagtggcaagccagtctcctctaggcttttca
tcagcaccattcagcagccccgtgaacgtgggttacccacagggaggtcctggagctcca
tctactaaacctctgccagcagccagccttcctcctcctcccataggtttcttcccttgg
ctagatccccacatggatcatgcagctcaggaatcttggactgatccctctgctgcaaga
ggaggccttcagaagaaaaagctgcctgagaaatttgctcctctagctcccatcacagct
ccagtaatgagcgtgcccactgagcctcaagggatccatcctcagctctctaggttgcaa
gaatctggccagtcacccccaggggcacccaaggaaggcagcctgcagtatcaccagcta
cctgcagagagaattgagaagaaggaggtgccccctgaacaccagggtctgaagaccaca
cttgaagggttggtgcaacgctgttctgctgttgccactgatccaaaaactcgaaggaag
ctagaggatgcattgcaacggctggagaccttgtatgacaaactccgtgagcaggcgctc
tctccagctatcctcatgggtctccatgaaattgcccgctgcattgaagctaggaactac
caacagggtctcatggttcacacccaagtggtgagcagcagcagtttcagtgaagtgtct
ggtttcatgcctgtcctgaaagtcctcatgaccattgctggcaagctgaatgtgtaa
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