Lagopus muta (rock ptarmigan): 125693604
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Entry
125693604 CDS
T09141
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125693604 (TRUB1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
125693604 (TRUB1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125693604 (TRUB1)
Prokaryotic type
125693604 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
125693604
NCBI-ProteinID:
XP_048801706
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Position
5:58525449..58558676
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AA seq
283 aa
AA seq
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MATGELGGRAAEKLFSLSGLFAVYKPKGATSAAVLNLLKERLLAEAGVQTKDNKRKKQAL
KIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGRATDTLDATGKVTEEK
PYDQVTKSDLENVLQKFTGDIMQVPPLYSALKKGGERLSTLMKRGEAVEAKPARPVRVYS
LSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASIQELTRTKHGPFTLEEHALHE
DRWTIDEIARSLEHCMSLFPGEQSHKKFKTELPGETAVSREDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggggagctggggggcagggcggctgagaagctcttctccctcagcgggctg
tttgccgtctacaagcccaaaggggccacctcggctgccgtgctcaacctgctgaaggag
aggctgctggcagaagccggagtgcaaacaaaagataacaaaagaaaaaagcaagccttg
aaaattggacatggtgggactttggacagtgcagcaacaggagttctggtggttggtatt
ggaaagggaacgaaattgctgaaaactatattggcaggttccaagaagtacactgccatt
ggactactgggcagagctactgatacattagatgctacaggaaaagtaactgaagaaaag
ccttatgaccaagtaacaaaaagtgatcttgagaatgtgctgcagaagttcacaggggac
ataatgcaggttcctccactctattctgctttgaagaagggtggagaaaggctatcaact
ctaatgaagagaggagaagcagtagaagcaaagcctgctcggccagtaagagtgtacagc
ctctctctccaacagttccagccgccactgttcacactggatgtcgaatgtggcggcggc
ttttatgtcaggagcctggtcagtgacattggcaaagaactttcaacctgtgccagcata
caggagctgacccgaaccaaacatggaccctttacgctggaggagcacgcgcttcatgaa
gacagatggacaattgatgaaattgcacgatccttagagcattgcatgtctcttttccca
ggagagcaatctcataaaaaatttaagacagagcttcctggagaaactgctgtgagccgt
gaagataagtga
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