Lagopus muta (rock ptarmigan): 125693703
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Entry
125693703 CDS
T09141
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125693703 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125693703 (PRPF38B)
Spliceosome [BR:
lmut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125693703 (PRPF38B)
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
125693703
NCBI-ProteinID:
XP_048801874
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All DBs
Position
5:20052747..20061764
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AA seq
549 aa
AA seq
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MANNGPAVGAGNCQGQQAVQHQPGAVPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRP
RKIKKDGKEGMEEIDRHTERRRSRSPRRSISPRRSPRRSRSRSHHREAHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSSDRALERRRSRSRERYRSRSRSRDRKGDRRDRDRERE
KENERSRKKERDYDKDRGSEREKDSDRSRERSKERKSKGDTEERRHKDDKDDKKHRDDKR
DSKKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSSKHKGESKEKSNKRSRSRSRG
RTDSVEKSRKRDHSPSKERSRKRSRSKERSHKHDHSDSKDHSDKHDRRRSQSTERESQEK
QQKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacggccccgccgtcggcgccggtaactgccaggggcagcaggcggtccag
caccagcccggcgcggtgccgccggcccagcagcagctgcagagcggagctcccaagccg
gcggcctcgggcaagcagggcaacgtgctgccgctgtgggggaacgagaagaccatgaac
ctcaaccccatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctctac
gagctcaaaacgtaccacgaagtggtggacgagatctacttcaaggttacgcatgttgaa
ccatgggaaaaggggagcagaaaaacagcaggccagacaggaatgtgtggaggggtacgt
ggtgttggaactggaggaattgtgtctactgccttttgtctgctctataaattatttaca
ctgaagctcacccgtaagcaagtgatgggccttattacacatacggactctccatatatt
agagctcttggatttatgtatattaggtacacacagccacctacagatctatgggactgg
tttgaatccttccttgatgatgaagaggacttggatgtgaaggccggtggaggctgcgtc
atgaccattggggagatgcttcgttccttcctcactaagcttgaatggttttccacattg
tttccaagaattcctgtgccagtccagaagactattgatcagcaaattaaaagcagacca
agaaaaattaaaaaagatggcaaggagggaatggaagaaatagaccggcatacagaacgt
agacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcatcgcgaagcccatgggtcatctagttttgatagagaacttgaaaga
gaaagagaacgtcagcgattggaacgtgaagctaaagagagagaaaaagagaggcgtagg
tctcgaagttctgatcgtgcactagaaaggagacgaagcagaagcagggaacgatataga
agccgtagtcgaagtcgtgacaggaaaggagacagaagagacagggatagggagcgagag
aaagaaaatgaacgcagccggaaaaaagagagagattatgataaggatagaggtagtgag
agagaaaaagatagtgatcggtctagagaaagatcgaaagaaaggaaaagtaaaggtgac
acagaagagagaagacacaaggatgacaaagatgacaagaaacaccgggatgataagagg
gattccaaaaaagagagaaagcatagcagaagtcgaagccgggaaagaaagcataggagt
agaagccgaagtaagaatacgggcaagcgcagcagaagcaggagcaaagagaaatcaagt
aagcataaaggtgaaagcaaagagaaatcaaataaacgaagtagaagcagaagcagggga
agaacagatagtgttgagaagtcaagaaaacgagatcacagtcccagtaaagaaagatct
agaaagcgtagtagaagcaaagaacgttcccacaaacatgatcacagtgatagcaaggac
cattcggacaaacacgatcgtcgaaggagccaaagtacagagcgagagagccaggaaaag
caacagaaaaacaaagatgagactgtgtga
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