Lagopus muta (rock ptarmigan): 125693748
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Entry
125693748 CDS
T09141
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125693748 (MMS19)
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125693748 (MMS19)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125693748 (MMS19)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125693748 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
125693748
NCBI-ProteinID:
XP_048801947
LinkDB
All DBs
Position
5:52798811..52813166
Genome browser
AA seq
1020 aa
AA seq
DB search
MAAGAEALAASVRDFVTGQQDGRAAELAAGVKDGSWTILQLVEALGFCLENTDPRTRGRG
IQLLSQVLLECHSLLQEKEVLHLVLFYENRLQDHHLMIPSVLQGLRALSLCEALAPGLAV
SMLKAIFQEVHVQSLMQQDRYTVYSIITNFMATREEELKGLGADFTFGFIQVMDGEKDPR
NLMVAFQIVRDLIVKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAV
LASTPQFAEFLLPLLIEKMDSDLQSAKLDSLQTLTACCAVYGQKELQEFLPSLWSSLRRE
VFQTASEKVEAECLSALHALSACLSRSVLSSDAEDLLDSFLSSILQDCRHHLCEPDMKLV
WPSAKLLQAAASASLRTYHRLTHSILPLLLEQYNKHSQSSQRRTILEMLLGFLELQQKWG
RVEEDESALLSFQETVCSVVFSALTDPSVQLQLVGIRALTVLGSLQGFLSPSHLELVVDH
LVRLALHEEDSQSSEAAMEAAGSLAPVYPKVFSGRMVPRLGEELQSEREEESSQDLCSLQ
QRCLQALAAVSTHTSIVKETVPVLLQHLRNVQKGSEAGNAQEVVSVCQSLHRVALQCQQD
AEGCWYYHQAVVPCLLAMAVQAATQESSHPLVSKALLEEEVLTAMVPVISAATTHLSPEL
AAQSVSHVVPLFLDGEVSFLPQNSFPCSFQPFEDGECLEPQRRLVALLMAFVCSLPHNVV
IPQQERLLRELLALSCSCSCPFTATTASKCFAGLVNKHPAGQQLDEILQLAVNRMEPGLT
EGPHRTQALTLLLWVTKALVLRYHPLSSHLTDKLLGLLSDVELGPTAADGFSLLMAESPD
VLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGADVKANYLKSLSHVLNHLPKPVLVTE
LPTLLSLLLEALSCSDRVVQLSTLSCLQPLLLEAPQIMSLHIDTLVTKFLSLTSSPAMAV
RIAALRCAHALTSLPTIVLLPYKARVIRALAKPLDDKKRLVRKEAVAARGEWFLVGSPGR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgctgaggcgctcgctgcttccgtccgagacttcgtgaccggacagcag
gacggccgcgccgcggagttggcggcaggagtgaaagatggaagctggactattctgcag
cttgtggaagccctggggttctgcctggaaaacaccgatccccggacacgagggcgaggc
atccaactgctgtcccaagtgctgctcgagtgtcactccttgctccaggaaaaggaagtt
ctgcacctggtcctgttttatgagaaccggctgcaagatcatcacctcatgatcccttca
gtgctccagggtctgcgtgcactgagcctatgtgaggcactggccccagggctagcagtt
tctatgctcaaagccatctttcaggaggtgcacgtgcagtccctgatgcagcaggaccgc
tacacagtctacagcatcatcaccaacttcatggccaccagggaggaagagctgaagggc
ctgggtgctgatttcactttcggcttcatccaggtgatggatggggagaaagatccccgc
aacctgatggtggccttccagattgtgcgtgatctcattgtcaagaactatgccctgggt
ccctttgtggaggagctgtttgaagtgacatcctgctacttccctattgattttactcca
ccccccaatgatccacatggcatccagagagaagatctgatccttagcctccgagctgta
ctggcctccacaccacagtttgctgagttcctgctccctctgctcatcgagaagatggat
tcagacctgcaaagtgccaagcttgactccctgcagactctgactgcttgctgtgccgtc
tatgggcaaaaggagctacaagaattcctccctagcctctggtcatccctgcgcagggag
gtgttccagactgcgagtgagaaggtcgaggcagagtgtctgtctgcattgcacgccctt
tctgcttgtctctcccgttctgtgctcagctcagatgctgaagacctgctggactccttc
cttagcagcattctgcaagattgcaggcaccatctgtgtgagcctgacatgaagctggtg
tggccaagtgccaaactgctgcaggcagcagcaagtgcctccctccgcacttaccatcgt
ctcacccacagcatccttcccctgctgctggagcagtacaacaagcattcgcagagcagc
cagagaaggacaatcttggaaatgctgctgggtttcctggagttgcagcagaagtgggga
cgtgtagaagaagatgaaagtgctctgctgtcgttccaagagacagtttgctctgtggtg
ttctcagcactcacagatcccagcgtgcagctccagctggtcgggatcagggcactgact
gtcctgggctctttgcaaggcttcctgtctccctctcacctggagctggttgtggatcat
cttgtccggcttgctcttcatgaagaagattcccagagcagtgaagcagcaatggaagca
gctggatctctggcccctgtctacccaaaagttttctctgggcgcatggtgcccaggctt
ggagaggagctgcagtcagagcgggaggaagagagctcccaggatctctgctccttgcag
cagcgctgcctgcaggccttggcagccgtgtccacgcacaccagcatcgtgaaggaaact
gtccctgttctgctgcagcacctccggaatgtgcagaaagggagcgaggccgggaatgcc
caggaggtggtctcagtatgccagagcctgcaccgcgtggccctgcagtgccagcaggac
gcggagggctgctggtactaccaccaggcagtggtgccgtgtctgctggctatggctgtt
caggctgccacacaagagagcagccacccactggtaagcaaggcgctgctggaggaggag
gtgctgactgccatggtccctgttatcagtgctgccaccactcaccttagccctgagctg
gctgcccagagtgtatctcatgtggtgcccctcttcctggatggagaggtctcctttctg
ccccaaaacagttttccttgctctttccagccctttgaggatggggagtgtttggagcca
cagagacgcctagttgccctcctcatggcctttgtctgttccttaccccacaatgtggta
attccacagcaggaacggttgctccgggaactgctggcactgagttgctcctgcagctgt
cccttcacagccaccacagcttccaagtgctttgcagggcttgtaaacaagcacccagcg
gggcagcagctggatgagatcttgcagcttgcagtgaataggatggagcctggccttaca
gaagggcctcaccgaacgcaggcactcaccctgctgctctgggtgactaaagccctggtg
ctgcgctaccaccccctgagctcccatctaacagacaagctgctgggcctgctgagtgat
gtggagctgggccccactgcagccgatggcttctccctgctcatggctgagtccccagac
gtgctgcacaagggctgccatgctgacgtgcgcatcatgttccgccagcgcttcttcact
gacaacgtgcccaagctggtgcaaggcttccatggggctggtgccgatgtgaaggctaat
tacctgaagagtctatcccatgtgctcaaccatcttcccaagcctgtgctggtgacagaa
ctgcccacgctgctttccctcctgcttgaggctttgtcctgctcagaccgtgtagtacag
ctctccaccctgagctgcctccagccgctgctgctcgaagccccccagatcatgagcctg
cacatcgacacactggtcaccaagttcctcagcctcacctccagccccgccatggctgtc
cgcattgctgccctgcgttgtgcccacgcgctcaccagcctgcccacaatagtgctgctc
ccatacaaggcccgagttatccgggcgctggccaagcctttggatgacaagaagaggctg
gtgcggaaggaggcagtagcagcacgaggggaatggttcctggtggggagcccgggcagg
tga
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