Lagopus muta (rock ptarmigan): 125693774
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Entry
125693774 CDS
T09141
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lmut01001
]
125693774 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125693774 (TRIM24)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125693774 (TRIM24)
Protein kinases [BR:
lmut01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125693774 (TRIM24)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125693774 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
PHD-1st_NSD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125693774
NCBI-ProteinID:
XP_048802039
LinkDB
All DBs
Position
1:complement(55615030..55672248)
Genome browser
AA seq
1045 aa
AA seq
DB search
MEEATATVAATAATAAAAAGGGPCPVDRTGAATLSGENEAESRQGPAERGGEAAPLNLLD
TCGVCGQPIQSRQPKLLPCLHSVCQRCLPQPDRYLMLPPAAPTKEPPPPPSSPGPSPLHC
TPVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEAHGFCVEC
VEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCD
KLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYIKCTGKQIQNRILEMN
QNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLMQQQLEVAGLSKQLEHA
MNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDASPVTNNTIQFHCDPSFWAQNIFN
LGSLVIEDKETPPHMPKNPGTETSLQPPGSLPSNQLSKFPMQINLAQLRLQHMQQQVMAQ
RQQAQRRAGPVGLPNPRMPGSVQQPPASHQAPPRLIHFQNHSSKSNGAAPPAQQMRFPQN
QSLPRQAIKLNPLQMAFLAQQAMKQWQVGNGQSSTAISTASSITSTPSSPTVTSAAGCDG
KTYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDTVARKDDVTAEQNHPKPPSNRTVQS
PNSSVPSPGISGGVSVTNIHPPIRSPSASSVGSRESSSSSSRPPGADSTHKVPVVMLEPI
RIKQESSTPNENFDFPIVIVKQEAEEESRPRNTSFSRSILTSLLLDGNHNSTSDEAVLRT
DAPDSTDDRPRILQENTTSAKIGWIGPSHTGEGRKEDDPNEDWCAVCQNGGELLCCEKCP
KVFHLSCHVPSLMNFPSGEWICTFCRDLSKPEVEYDCDKPTHNPEKRKLEDTVGLAPIDR
RKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKNRLQVNDSFYTKPEDF
VADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEELLKSLYPGRKFPVQSNCQSEKDNAEL
SDDSDDDIVQPRKKRLKGEDRQLLK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcgacggctacggtagcggcgacggcggcgacggcggcggcggcggccggg
ggggggccgtgcccggtagatcggacgggggcggcgacgctgagcggggagaacgaggcc
gagagccgccagggcccggcggagcggggcggggaggcggccccgctcaacctgttggac
acttgcggcgtgtgcgggcagcccatccagagccggcagcccaagctgctgccctgcctc
cactccgtgtgccagcgctgcctgccgcagcccgaccgctacctcatgctgcctcccgcc
gccccaaccaaggagccgccgcctcccccttcctcgcccggcccctcgcccctgcactgc
acgccagttggtgttatccgctgtccaatttgtggtcaggaatgcgcagagagacacatc
atagataacttttttgtgaaggataccacagaggttcctagtagcacagtagaaaaatca
aatcaggtctgcacaagttgtgaagacaatgcagaagctcatgggttttgtgtggaatgt
gtggaatggttgtgcaagacctgcatcagagctcaccagagggttaaattcacaaaggat
catactgtaagacagaaagaggaagtatctccagaggcagttggtgtgaccagtcagcga
cctgtgttttgccctttccacaaaaaggagcagctgaagctgtactgtgaaacgtgtgac
aagttgacctgccgagattgtcagttactagaacacaaagagcacaggtaccagttcata
gaagaagcttttcagaaccagaaagtgatcattgagactctaatcactaaactgatggag
aagactaaatatataaaatgtacagggaagcagatccagaacagaattcttgagatgaat
cagaatcaaaagcaggtggaacaggatattaaagttgccatatttacactgatggtagaa
ataaacaaaaagggaaaagctctgctgcatcagttggagactctggcaaaagagcatcga
atgaaacttatgcaacaacaactggaagtggcaggtctctctaaacagctggaacatgcc
atgaatttttccaaatgggcagtttctagtggaagcagcacagctctactctacagtaaa
cgcttgattacatatcgactacgctatcttctccgagcgaggtgtgatgcttcaccagtg
actaacaataccatccagtttcattgtgatcctagcttctgggctcaaaatattttcaat
ctaggttctctggtaattgaagataaagaaacccctccacacatgcccaagaaccctggg
acagaaacaagtttgcagccaccaggcagcttaccttcaaatcagctatctaagttccca
atgcaaataaacttggctcagctccgtctccagcacatgcagcaacaagtcatggcgcag
agacagcaagctcagcgcagagcaggtccagtaggtttaccaaatccaagaatgccagga
agtgtgcagcagcctcctgcttcccatcaggcacctccacgtttgattcattttcagaat
catagctccaagtccaatggtgcagctcctcctgcgcaacagatgagatttccccaaaat
cagagcctaccaaggcaagcaataaagctcaacccattgcagatggcattcttggcacag
caagctatgaagcagtggcaggtcggtaatggacaaagttcaactgccatttcaacagca
agcagcataacttctactccatccagccccacagtcactagtgctgcaggatgtgatggg
aagacatacggtcctcctgtgatagatttgagttctccagtgggtagctcctacaatctg
ccatctcttcctgatattgattgttcaggaaacatcacactggatactgttgcgaggaag
gatgatgtcactgcagagcagaaccacccaaagcccccttcaaacagaactgtgcagtca
ccaaattcatcggtaccatcaccaggcatttcaggaggtgtcagtgtaacaaacatacat
cctccaatacgttcacccagtgcctccagtgttgggagcagagagagttctagctcttcc
agccggcctccgggagctgattctacacacaaagtcccagttgttatgttggagcctatc
agaattaagcaggagtcaagtacaccaaatgagaactttgatttcccaattgttattgtg
aagcaagaagcagaggaggaatcccggcctcggaataccagcttttcaagaagcatactg
acttcattgctgttagatggtaatcataactcaacttctgatgaagccgttttaagaaca
gatgccccagacagcacagatgatcggccaaggatactgcaggagaataccaccagtgcc
aagataggatggataggcccctcacacactggagagggcagaaaagaggacgatcccaat
gaagactggtgtgcagtatgtcaaaatggtggggagctcctttgctgtgagaaatgtccg
aaagtattccatctttcctgtcatgtcccttcattgatgaactttccaagtggagagtgg
atttgtacgttctgtcgggatttgtctaagccagaagttgaatatgattgtgataaacca
actcacaaccctgaaaaaagaaaactggaagacactgtgggcttggcaccaatagaccgt
aggaagtgtgaaagactgctgctatacctctactgtcatgaaatgagtcttgcttttcag
gatccagttcctcctacagttcctgattactacaaaataatcaaaaagcctatggacttg
tcaaccatcaagaatagacttcaagtgaacgattcgttctacacaaagccagaagatttt
gtggccgacttcagactgattttccaaaactgtgctgaatttaatgagcctgattcagaa
gtggctgatgccggcatgaagcttgaagcatactttgaagaactactaaagagcctttat
cctgggaggaagttccctgtacaatctaactgccagagtgaaaaagataatgcagaactt
agtgatgactcagatgatgacattgtacagcctcggaaaaaacgtctcaaaggagaagac
cgtcagttgcttaaatga
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