Lagopus muta (rock ptarmigan): 125693799
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Entry
125693799 CDS
T09141
Symbol
RBM26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125693799 (RBM26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125693799 (RBM26)
03041 Spliceosome [BR:
lmut03041
]
125693799 (RBM26)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125693799 (RBM26)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125693799 (RBM26)
Spliceosome [BR:
lmut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125693799 (RBM26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_3
Med15_M
COG5_N
Motif
Other DBs
NCBI-GeneID:
125693799
NCBI-ProteinID:
XP_048802104
LinkDB
All DBs
Position
1:151466551..151516966
Genome browser
AA seq
1019 aa
AA seq
DB search
MVVKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCVDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQEKETKKEEIVKEEEREKKF
SRRLNHSPPQSSSRYRDTRSRDERKKDERSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRSRSRTRSRERDLGKPKYDMDRTDPLENNYTPVSSVTNIS
SGHYPVPTLSSTITVIAPAHHGNNTTESWSEFHEEQLDHNSYGRPPLPKKRCRDYDEKGF
CMRGDMCPFDHGSDPVVVEDVNLPGILPFPAQPPVVEGPPPPGLPPPPPILSPPPVNLRP
PVPPPGPLPPSLPPVTGPPPPLPPLQPAGMDAPPNSATSSVPTVVTTGIHHQPPPAPPSL
FTAGVVLRLCPQETYDTDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPRE
KPPNKSSMRIVVDAESRKRTIGAGDGGVPTKKTWFDKQNFNRTNSPGFQKKVQFGNENTK
LELRKVPPELNNISKLNEHFSKFGNLVNLQVAYQGDPEGALIQFATHEEAKKAISSTEAV
LNNRFIKVYWHREGSVPQIQTTPQKVIQPLVQQPSLPVVKQSVKERLGPVPASNIEPTEA
QSANTEVTQNVTKLSVKDRLGFVSKPVTPATEKVLSTSTGLTKTVYNPAALKAAQKSLPV
VSTSVLDSNEAQKKKQEALRLQQDVRKKKQEILEKHIETQKMLISKLEKNKAMKSEDKAE
IMKTLEILTNSITKLKDELKGVSSGGGTPLKSMKTKTQMQKELLDTELDLYKKMQAGEEV
TELRRKYTELQLEAAKRGILSSVRGRGVHARGRGASRSRGRGIRGRGRGRGVPVHAVVDH
RPRALEISAFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAIHGSRF
KGQELKLAWNKPVASMSAVETEEAEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtggttaaaatgatcatagaaaacttcgaggcgctgaaatcctggctcagcaaaacg
ttggagcccatatgtgatgcagatccatctgccctagctaaatatgttctggctttggtg
aagaaggataaaagtgaaaaggagctgaaagcattgtgtgttgatcagctggatgtattt
cttcagaaagaaactcagatatttgtggaaaaactgtttgatgctgtgaatacaaaaagc
tatctacctccaccagaacagccatcatcaggaagcctaaaagtagagttctttcagcac
caggagaaagagacaaaaaaagaagagatagttaaagaggaagagcgagaaaagaagttc
tccagaagactaaatcacagccctcctcagtcaagttcgcgctacagagataccagaagc
cgcgatgaaaggaaaaaagatgaacgttctcgcaagagagattatgaccgaaatcctccc
aggagagattcctacagggatcgatacaacagaagaagagggagaagtcgaagctacagc
aggagtcgaagtaggagttggagcaaagagagacttcgggacagggatcgagaccggagc
agaagccgaagtagaacacgaagcagagaaagggatttgggaaagccaaaatatgatatg
gatagaacagatccattagaaaacaattatactccagtttcttctgtaacaaatatttca
tctggccactatcctgtccctacactgagcagcactattactgttattgctcctgctcat
catggaaataacactactgaaagctggtcagaattccatgaagagcagctggaccacaac
tcctatggcagacctccactgccaaagaagcgctgtagagattatgacgaaaagggtttc
tgtatgagaggagatatgtgcccttttgatcatggaagcgatccagtagtggtagaagat
gtgaatcttcctggcattctgccttttccagcacaaccccctgttgttgaaggaccacct
cctcctggacttcctccccctccaccaattctgagtcctcctcctgttaaccttagacct
ccagtaccaccaccaggccccttaccacctagccttccacctgtaacaggaccaccccct
ccacttcccccactgcagcctgctggcatggatgctcccccaaattcagcaactagttca
gttcctactgttgttacaacgggtattcatcaccagccgcctcctgctccaccctctctt
tttacagcaggtgtagtactgaggctttgcccacaagaaacgtatgacacagatggctat
aatccagaagctccaagtataacaaacacttccagacctatgtatagacacagagtacat
gctcaaagaccaaatttgataggactcacatcaggtgatatggatctaccacccagagaa
aaacctcctaataaaagcagtatgagaatagtggtagatgctgaatccaggaaaagaaca
attggtgcaggagatggaggagttcctacgaagaagacttggtttgacaagcaaaatttt
aacagaacaaatagtccaggtttccagaagaaggtacagtttggaaatgaaaacacaaaa
cttgaattgaggaaagttcctccagaacttaacaatatcagcaaacttaatgagcacttc
agcaaatttggaaatttggtcaacttgcaggttgcatatcaaggtgatccagaaggtgcc
cttattcagtttgccacacatgaggaagccaagaaagcgatatcaagtacagaagcagta
ttaaataatcgttttatcaaagtctactggcatcgagaaggaagtgtaccgcaaatccaa
actactccacagaaggtaatacagcccttagttcaacaaccgagtttaccagtagtgaaa
caatcagtcaaggagcgattaggtccagtacctgcaagtaatattgaacctacggaagca
cagagtgccaatacagaagtcactcagaatgtgactaaattatctgtgaaggatagactg
ggttttgtgtcaaagccagttactccagcaactgaaaaggttttatccacttctactggc
ttgacaaaaactgtgtacaaccctgctgctttgaaggcagcacagaaatctttgcctgtt
gtttccacttccgtgctagactctaatgaagcacagaagaaaaaacaggaagcactgcga
cttcaacaagatgtgagaaaaaagaagcaagaaatcttagagaagcacattgaaacacaa
aagatgctgatttcaaagcttgagaaaaataaagccatgaagtcagaagacaaagcagaa
atcatgaaaacactggagattctaactaacagcattaccaagttaaaagatgaattaaaa
ggtgtatcatcaggaggagggactcctctaaaaagcatgaaaactaagactcagatgcag
aaagagttactagatactgaactggatttatacaagaagatgcaagctggggaggaagtt
actgaattaagacggaaatacacagagctgcagctggaagctgccaaacgaggaattctt
tcttcagttcgtggcagaggggtccatgcaagaggtcgaggtgcatcacgtagcagaggt
agaggaatacgtggacggggtcgaggcagaggagttcctgtacatgctgttgtggatcat
cgaccaagggcattagaaatttctgcgtttacggaaagtgatagagaagatcttcttcct
cattttgcgcaatacggtgaaattgaagattgccagatagatgactcttcgctccatgcg
gtgattacctttaaaacaagagcagaagctgaagctgctgcaatccatgggtctcggttt
aaaggacaggagttaaagttggcatggaacaagcctgttgctagtatgtcagctgttgaa
acagaagaagctgaacctgatgaagaagaatttcaggaagaatctttggtggatgactca
cttcttcaagatgatgacgaagaggaggaggataatgaatctcgttcatggagaagatga
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