Lagopus muta (rock ptarmigan): 125693848
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Entry
125693848 CDS
T09141
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125693848 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125693848 (GTF2B)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125693848 (GTF2B)
Prokaryotic type
Archaeal type
TFB
125693848 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
125693848
NCBI-ProteinID:
XP_048802193
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All DBs
Position
5:complement(14789106..14806433)
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AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacgagccgtttggatgctcttccgagggtgacttgcccaaaccatccagat
tccattttagtggaggattacagagctggtgatatgatttgttcagagtgtgggctagta
gtaggtgatcgtgtcatagatgtagggtcggagtggagaactttcagcaatgataaagca
acaaaagacccatctcgagttggggatacccagaatcctttgttgagcgacggtgacctg
agtacaatgattggaaagggcacgggtgcagcaagttttgatgaatttgggaattccaag
taccaaaatcgcagaacgatgagcagctctgatcgtgcaatgatgaacgcctttaaagaa
attacaaacatggcagacagaatcaacctccctagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcagaagagcctgaagggaaggagtaatgatgctatagct
tctgcttgtctctacatagcttgtaggcaagaaggtgttccaagaacatttaaagaaata
tgtgcggtgtccaggatttcaaagaaggaaataggtcggtgttttaaacttattctgaaa
gctcttgaaaccagtgttgatctgattacaactggagacttcatgtcaagattctgttca
aatctgggtcttcccaaacaagtgcaaatggcagcaacacacattgcccgtaaggctgtg
gaattagatttggttcctgggagaagccctatttctgtagcagctgcagctatttatatg
gcatcacaagcttctgcagagaaaaggacgcaaaaagaaattggtgacattgctggtgtg
gctgatgttacgatcagacaatcatacaggctcatctatcctcgagctcctgatctcttc
ccagcagatttcaagttcgatactccagtagacaagctaccacagctgtga
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