Lagopus muta (rock ptarmigan): 125693944
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Entry
125693944 CDS
T09141
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125693944 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125693944 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125693944 (NFKB2)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125693944 (NFKB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
125693944
NCBI-ProteinID:
XP_048802418
LinkDB
All DBs
Position
5:47189325..47197341
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AA seq
949 aa
AA seq
DB search
MLGLDGLLRPAASGTGLSGAACLPAAAGPAQRPLFPQAGGRPRSDMDEHFQPCLDGIDYD
DFSFGSHMVEQKEPLMETAVGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGHKT
YPTVKICNYEGIARIEVDLVTHSDPPRVHAHSLVGKQCTEAGNCVAVVGPKDMTAQFSNL
GVLHVTKKNMMEIMKEKLKKQKTRNTNGLLTEAELREIELEAKELKKVMDLSIVRLRFTA
YLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKD
DIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGD
VSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGAGGFGAGGGGNLSFP
YSSGLGYNNLYSSSPHPVGGGYQGGVQMKAPNESGDGGDREVPTESNYCRELQRHAHLCR
LWLLARRNAHALLDYSVTADPRMLLAVQRHLVASQDENGDTPLHLAIIHEQTAVIKQLIE
VVVSIPSQQIINITNNLQQTPLHLAVITKQPQVVQLLLQAHANPTLLDRYGNSLLHLALQ
TGDEEMLRTLLAHLDSATPYLLCLPNFHGLLPVHLAVKAKSPACLDLLVRKGADVNGVER
QGGRTPLHLAVEMENLNMATHLVKKLGANVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAG
ADVQRENDEPISPSSSEASSDTDGDPEEQEQAMELGEPAPSPHPTPEEEQGETGPRQRRC
HTALDLTRSQKVRDILLQASQLCPDTELPTAPRPGNVLSLDGDALQGLEQLLNQDSSGSD
WMELAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHGAVRMLRKP
EPLEKLQSTEVKEDSAYGSESVEEEQAATLKPRPVPEGELPHSQQQQVH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggctgctgcggccggccgcctccggcacgggactttccggagcg
gcgtgccttcctgccgccgccggccccgctcagcgcccgctcttcccgcaggccggcggc
cggccccgcagcgacatggacgagcacttccagccctgcctggatgggattgactacgac
gacttcagctttggctcccacatggtggagcagaaggagcccctgatggagacagcagtc
ggcccctacctggtgatcattgagcagccaaagcagcggggctttcgatttcggtatggc
tgcgaaggcccttcgcatggggggctgccaggagcctccagcgagaaggggcacaagacc
tatcctactgtcaagatctgcaactacgaagggatagcgcgcatcgaggtggacctggtg
acacacagcgaccctccgcgtgtgcatgcacacagcctggtgggcaagcagtgcaccgag
gccggcaactgcgtcgccgtcgtggggcccaaagacatgacggcacagttcagcaacctg
ggagtgctccatgtcaccaagaagaacatgatggagatcatgaaggagaagctgaagaag
cagaagacgcgcaacacaaatgggttgctgacagaagctgagctgcgtgagatcgagctg
gaggccaaggagctgaagaaggtgatggacctgagtatcgtgcggctgcgcttcaccgct
tacctccgtgacagcagtggaaacttcactctagcactgcagccagtcatctctgacccc
atccatgacagcaagtcccctggtgcttccaatctcaagatctcgcggatggacaagact
gcgggctcggtgcggggtggggacgaggtctacctgctgtgcgacaaggtgcagaaagat
gacatcgaggtgcggttctacgaggacgacgagaatggctggcaggcctttggggacttc
tcccccacggacgtacacaagcagtacgccatcgtcttccgcacgcccccctaccacaag
cccaaaattgaccgtcctgtcaccgtgttcctgcaactgaagcggaagcgcgggggggac
gtcagcgactccaagcaattcacctattaccccgtggtggaggataaagaggaggtggag
cggaagcgcaagaaggtgctgcctcagtttcctcagcacttcggcgggggctcacacatg
gggggtgccggcggtgctgggggctttggagcaggaggaggtggtaacctcagtttccct
tattcatccggactgggatacaacaacctctactcctccagcccgcaccctgtaggggga
gggtaccagggtggcgtgcagatgaaggcccccaacgagagtggggatggaggtgacaga
gaggtgcctacagaaagcaactactgcagggagctgcagcggcatgcccacctgtgccgc
ctgtggctgctggcacgccgcaacgcccatgccctgctggactactcagttactgccgac
ccccgcatgctgctggctgtgcagagacacctggtagcctcacaagatgagaatggggac
acgcccttgcatctcgccatcatccatgagcagacggctgtgatcaagcagctaattgag
gtggtggtcagcatccctagccagcagatcattaacatcaccaacaatctgcagcagaca
ccgctgcacctggcagtcatcaccaagcagccgcaggtggtgcagctcctgctgcaagcc
cacgccaaccccaccctgctggaccgctacggcaactccctgctgcacctggcactgcag
acaggtgatgaggagatgctgcggacgctgctggcccacctggactctgccaccccctac
ctgctgtgcttgcccaacttccacggtctcctgcccgtacacctggctgtgaaggcgaag
agcccagcctgcttggacctgctggtcaggaagggcgcggatgtgaacggcgtggagagg
cagggcggcaggaccccactgcacctggctgtggagatggagaacctcaacatggccacg
cacctggtgaagaagctgggagcaaatgtcaacagccggacctttgctggtaacaccccc
ctgcacctggctgccggcctgggctccccaaccctcaccaaactgctgctcaaagcaggg
gcagatgtgcagcgtgagaacgacgagcccatcagcccctcctcgtcagaggccagcagc
gacacagatggcgaccccgaggagcaggagcaggcaatggagctgggggagccagcccca
agcccccatcccactcctgaggaggagcagggggagacagggcctcggcagcgccgctgc
cacacagctctggacctgacccggagccagaaggtgcgggacatcttgctgcaggcctcc
cagctatgccctgatactgagctgcccaccgccccccggccagggaatgtgctgtctctg
gatggtgatgcgcttcaggggctggagcagctgctgaaccaggacagcagcgggtcagac
tggatggagctggccaagaggctggggctctgcagcctggtggagacctacaaggacacc
ccttcacccagtgtcagcctgctgcgcagctatgagctggccgggggcagccttgggggg
ctgctggaggcgctggactccatggggctgcacggggctgtcagaatgctgcgcaaacct
gagccgctggagaagctgcagagcacagaggtcaaggaagacagtgcctatgggagcgag
tcggtggaggaggagcaggcggccaccctgaagccgaggccagtgccagagggcgagctg
ccccacagtcagcagcagcaggtgcactga
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