Lagopus muta (rock ptarmigan): 125693973
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Entry
125693973 CDS
T09141
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03020
RNA polymerase
lmut04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125693973 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125693973 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125693973 (POLR3A)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125693973 (POLR3A)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125693973 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125693973
NCBI-ProteinID:
XP_048802487
LinkDB
All DBs
Position
5:43373448..43407263
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRESDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCCIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSTFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDIHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLHAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDTDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPLVFD
NNEFHIPIVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgagagcgatgtggccaagaaaataagccacatctgcttc
gggatgaaatccccagaggagatgcggcagcaggcccacatccaggtggtcagcaagaac
ctgtacagccaggacaaccaccacgccccactgcagtacggcgtgctcgaccaccgcatg
ggaacaagtgaaaaagatcgtccctgtgaaacctgtggaaaaaacctggctgactgtttg
ggacattatgggtacattgacttggaactgccgtgttttcatgttggatacttcaaagct
gtgattggcatcttgcagatgatctgcaaaacctgttgctgtatcatgctgtcagtagaa
gaaaaaaaacagtttttggattacttgaagcggccaggccttacatatcttcagaagagg
gggctgaaaaagaaggtgtctgaaaagtgccggaagaaaaacacttgtccttactgtggt
gcctttaatggaactgtgaagaagtgtggtttactgaaaataatacatgaaaagtacaaa
accaataagaaagttgtagatccaatagtatccactttcttgcagtcctttgaaactgcc
atagaacataacaaagaagtagagcccttactgggaagagctcaggaaaatttgaatcca
ttagtagtattgaacctctttaaaagaatcccagcagaagatatccctctgcttctaatg
aacccagaagcgggtaagccttcagatttgatcctcacaaggcttctagtgcctccactg
tgtatcagaccctctgtcgtgagtgacttgaagtctggcaccaacgaagatgacttgaca
atgaaactgacagagatcattttcctcaatgatgtaataaaaaagcacaggatatcagga
gctaaaacacagatgattatggaagattgggacttccttcaattgcagtgtgccctttac
atcaacagtgagctttctggaattcctctgaacatggcacctaaaaagtggactagaggc
tttgtccagagacttaagggaaagcaaggtcggtttagggggaatctgtctggaaagcga
gtggatttctctggcagaacggttatttcccctgatcctaacttaagaatagatgaagta
gcagtgcctattcatgttgctaaaatactgacttttcctgaaaaggtaaacaaagcaaat
attaattttatgaggaaacttgtccgaaatggtcctgatattcatcctggagccaacttc
attcagcaaaggcacacacagatgaaaagattcttgaaatatggaaaccgagaaaagatg
gcacaggagctgaaatttggtgatattgtggaacggcatcttatagatggtgatattgtc
ctgttcaaccgacagccctctcttcataagctgagcattatggctcacattgctagagta
aaaccccataggacattcagatttaatgaatgtgtctgtacgccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaaggaatggagaacctctaattgct
gctattcaagatttcttaacaggtgcctatcttcttacactaaaagatactttctttgat
cgagcaaaagcctgtcaaatcattgcttctattctggttggcaaggatgaaaaaattaaa
gttcgtcttcctcccccagcaattctgaagcctgtaacactctggacaggaaagcaggtt
ttcagcctcattctcaagcccagtgatgactgtcctgtaaaagccaatctgcgaaccaag
ggcaagcagtattgtggcaaaggggaagatctgtgttacaatgattcttatgtcacaatt
cagaacagtgagttaatgagtggcagtatggacaaaggaaccctaggttctggatcaaaa
aacaatatcttctacattttgctgagagactggggacaagtggaagctgcagatgccatg
tcaaggctagccagacttgctcctgtctatctttctaatcgtggcttttcaattggaatt
ggtgacgttaccccaggtcaaggcctgttaaaagctaagtatgagctgctgcatgctggt
tataagaaatgtgatgaatatattgaagcactgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacgctagaggctttaatacttaaagaactctctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtccccttattatg
gctctttgtggttctaaaggctccttcattaatatatcccagatgattgcatgtgtaggt
cagcaggctatcagtgggtccagagttcctgatggatttgagaataggtctttgcctcat
tttgagaagcattctaagcttccagcagcgaaaggctttgttgctaacagcttctattct
ggattgactcccactgaatttttttttcacactatggctggtcgagaaggtctggttgac
actgctgtaaaaacagctgaaactggatacatgcagaggcggctggtaaagtcccttgaa
gatctctgttcacagtatgatttgacagtcagaagttctactggtgacattattcagttt
atttatggaggagatggcttggatcctgcagcaatggaagggaaggatgaaccactggaa
tttaagcgagttctagacaatatcagagctgtatatccatgccgaagtgaaccagccctt
agtaaaaatgaattggtgttaacatctgaatctatcatgaagaagaatgaatttctttgc
tgccgagacagctttctgcaggaaataaaaaaattcatcaaaggtgtttctgagaagatt
aaaaaaactagggacaagtatggtatcaatgacaatggcacgactgagccacgggtttta
tatcagttggataggattactccaacacaactggagaagtttctagagacctgtagggac
aaatacatgagggcacagatggagcctggttctgcagtaggagctctttgtgcacagagc
atcggtgagcctggcacacagatgactctgaagactttccattttgctggggttgcttca
atgaacattactctgggtgtgccaagaatcaaggaaattattaatgcttcaaaagcaatt
agcacacctattataacagcacagttggacacagatgatgatcctgattttgcccgcctg
gttaaaggaagaattgagaagactttgttaggagagatatcagaatatattgaagaagtg
tttcttccagatgactgtttcatcctagtgaagctgtctttggagcgcattagactactg
agattagaggtgaatgcggagactgtgcgctactcaatttgcatatctaaactcagagtg
aagcctggagatgttgctgtccatggagaagcagtcgtatgtgtgacgccccgtgaaaat
agcaagagttcaatgtattatgtgttgcagtccctgaaagaagaactaccaaaggttgtt
gtgcagggtataccagaggtttcccgtgctgtcatccatattgatgaacaaagtggtaag
gaaaagtacaaacttctagttgaaggtgataacctgcgagctgttatggctactcatgga
gtgaaaggaacaaaaacatcctctaacaacacttacgaggtagagaagacacttggaatt
gaagctgctcgaaccaccattatcaatgagattcagtatacaatggtgaaccatggtatg
agcattgacaggaggcatgttatgttgctgtctgatcttatgacttacaagggtgaagta
ctgggtattaccaggtttggactggcaaaaatgaaggaaagtgtgttaatgctggcttct
tttgaaaagactgcagaccatctctttgatgctgcctactttggacagaaggactctgtt
tgtggtgtttctgagtgcatcatcatgggaatcccaatgaatattggaacaggactcttt
aagcttttgcacaaagcagacaaagaatcaacccctcctaggaggcctctggtatttgat
aataacgagtttcatatccccattgttacataa
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integrated database retrieval system
