Lagopus muta (rock ptarmigan): 125693975
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Entry
125693975 CDS
T09141
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
125693975 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125693975 (KCNMA1)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
125693975 (KCNMA1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
125693975
NCBI-ProteinID:
XP_048802489
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Position
5:43585909..44022192
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AA seq
1339 aa
AA seq
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MANGSGGGSYPGGSGGGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQQLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCK
ACHDDITDPKRIKKCGCKRQVKNAARSSYPKSSYQFKNTATIALVGPKSTEGALEPVPLV
NNRKGSLFLPNNPSLLQLNLLNSVEQGKSTYCRLQRALSLPVKYRYHSQKPGLNQDLLED
EQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKYDSTGMFHWC
PAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKHIV
FVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASL
QDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQPSITTGAN
IPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQ
CTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSYSSSKKSSSAHSIP
STANRPNRTKTRDSREKQNATRMNRMGQAEKKWFTDEPDNAYPRNIQIKPMSTHMANQIN
QYKSTSSLIPPIREVEDEC
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcggcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggtcactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccagaagatcaatggtggtggagatacgcaggcagatggggcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacctctgtg
aaagactgggcaggagtcatgatatctgcccagacactaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagattgacatggctttcaat
gtgttcttcctactctacttcggcttgcgtttcatagcagccaatgacaagctatggttt
tggctggaagttaactcagtagtagatttcttcacggtccctccagtgtttgtttcagta
tatttaaacagaagttggctcggtttaagatttttaagagcccttagactgatacagttt
tcagaaatattgcagtttctgaatatccttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacatggctgacagcagctgggttcatacatttggtggag
aactcaggggatccttgggaaaattttcaaaataatcaacagttaacgtattgggaatgc
gtttatttactgatggttacaatgtctactgttggttatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcatataacacttgaaagcgtgtcc
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaacgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggttcagtcctcaatccccatgacctggcaagagtaaagatagag
tcagcagatgcgtgcctaattcttgccaataaatactgcgctgacccagatgctgaggat
gcctccaatattatgagagttatttcaataaagaattatcatccgaagataagaattatc
actcagatgttgcagtatcacaataaggctcatctgttaaatattccaagttggaactgg
aaagaaggggatgatgcaatctgtctcgctgagctcaagctgggtttcatagctcagagt
tgcctggcaccaggcctttcaacaatgttagccaacctcttttccatgagatcattcata
aagattgaggaggatacgtggcagaaatactatctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactggtg
tttgcgaaactaaagctcttaatgatagccatagaatacaagtcggaaaaaagagaaagc
agaagccgaaagcgtatattaatcaatcctggaaaccatgtcaagattcaagaaggtacc
ttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcatttttttactgcaag
gcctgccatgatgacatcacagatcccaaaaggataaaaaagtgtggctgcaaacggcaa
gtaaagaatgcagctagatcaagttacccaaaaagctcatatcaattcaagaatacagct
actattgcactggttggtcccaagtccactgaaggagccctggaacctgttccacttgtt
aataaccgtaaagggagcctcttcctacccaacaatccctcgctgctgcaacttaattta
ttgaattctgttgaacaaggaaaatctacgtactgtagattgcaaagggcactcagcttg
cctgtaaaatatcgctaccactcccaaaagcctgggttgaaccaagatctccttgaagat
gagcagccgtcaacactgtcacccaaaaaaaagcaacgaaatggaggcatgcgaaattct
cccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggcaatgaacag
attgacaatatggatgccaatgtgaaaaaatatgactctacaggaatgtttcattggtgt
ccggccaaggatattgaaaaggtcattttgactcgaagtgaagcagcgatgacagtttta
agtgggcatgtagtcgtttgcatatttggggatgttaaatctgctttgattggattaaga
aatttagtgatgccattacgagccagcaactttcactaccatgaactcaagcacattgtg
tttgtgggttcacttgaatacctgagaagggaatgggagacactgcataacttccccaag
gtttcaatcttgcctggtacaccattaagtcgggctgatttaagggctgtcaacatcaac
ctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctg
caggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagc
attggggtcttgcaggctaattcccaaggttttacaccccctggtatggataggtcatct
ccagacaacagtcctgtccacggcctgttacgtcaaccctccattacgacaggagccaac
atccctattataacagagctagctaagcctggcaaacttctgcctttggtttcaatcagt
caggaaaaaaacagtggaacccacatactaatgataactgaactggtaaatgattcaaat
gttcagttcttggaccaagatgatgatgatgacccagacacagaactgtacctcacacag
ccctttgcatgtggaaccgcatttgctgtcagcgtgctggactctctcatgagcgcaaca
tacttcaatgacaatatcctcacactgatacggacattggtaacaggaggagccacacca
gagctggaagcactgattgctgaggaaaatgctttgagaggaggttacagcacgccccag
acacttgcaaacagggacaggtgtcgagttgctcagttggctttgtacgatgggccattt
gcagacttaggggatggaggctgttatggagatctattttgtaaagcactgaaaacatat
aacatgctttgctttggaatttatcgattaagggatgctcatctaagtactcccagccaa
tgcactaaacgttatgttatcacaaacccaccgtatgagtttgagcttgtgccgacagac
ttgatcttctgtttgatgcagttcgaccacaacgctggccaatcccgggccagtctttct
cattcctcccattcctcctattcttccagcaagaagagctcatcagctcactccatccca
tcaacagcaaaccgaccgaaccgcaccaagaccagggattcccgggaaaaacagaatgca
acaaggatgaatagaatgggccaagcagaaaagaaatggtttacagatgagccggataat
gcctatcccagaaacattcaaatcaagcccatgagcacccacatggccaatcagatcaat
caatacaaatcgacaagcagcttgataccaccaatcagagaagttgaagatgaatgttga
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