Lagopus muta (rock ptarmigan): 125694012
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Entry
125694012 CDS
T09141
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125694012 (TRIM8)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125694012 (TRIM8)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125694012 (TRIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
TRIM_CC
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_10
zf-RING_5
PAS-like
FliD_C
U-box
Motif
Other DBs
NCBI-GeneID:
125694012
NCBI-ProteinID:
XP_048802583
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All DBs
Position
5:53734391..53754656
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AA seq
551 aa
AA seq
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MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKETGLVRCPECNQAYN
QKPNLEKNLKLTNIVEKFNSLNLEKPPSVLHCVFCRRGPPLPAQKICLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQFCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMH
QILDEDLRKTMEILDKAQAKFCNENAAQVLHLNERMQEAKKLLSSVQVMFDKTEDINFMK
NTKSVKILMDRTQNCTGGSLPPPKIGHLNSKLFLNEITKKEKQLRKLLEGPLSTPVPFLQ
SIPMYPCTVSNSGAEKRKHSTAFPEGSFLEPSSGTVASQYMSQGASAGEGQSAQAMVPCS
STQHIVGLPSGPQPVHSGSVFNPSHYPNTTSSQQSVLSQYGGRKILVCSVDNCYCSSVSN
HSGHQPYPRSGHFPWTVSSQEYSHPLPPAPAVPQSLPGLAVRDWIDASQQHGRQDFYRVY
GQPSAKHYVTS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaactggaagaactgttttgaggaggagctcatctgccccatctgcctgcac
gtcttcgtggagcccgtccagctcccctgcaagcacaacttctgccggggctgcatcggt
gaggcgtgggccaaggagacgggcttggtgcgctgtccggagtgcaaccaggcgtacaac
cagaagcccaacctggagaagaacctgaagctcaccaacatcgtggagaagttcaactct
ctcaacctggagaagcctccctctgtcttgcactgcgtcttctgccgccggggcccgccg
ctgcccgcacagaagatctgcttgaggtgcgaggccccgtgctgccagtcccacgtccag
acccacctgcagcagccctccacggcccgtgggcacctcctggtggaggcggacgacgtg
cgggcctggagctgcccccagcacaatgcctaccgcctgtaccactgcgaggccgagcag
gtggccgtctgccagttctgctgctactacagcggggcccaccagggacactcggtctgc
gatgtggagatccggcgcaatgagatcaggaagatgctgatgaagcagcaggaccggctg
gaggagcgggagcaggacattgaggagcagctctacaagctggagtctgacaagcggctg
gtggaggagaaagtgagccagctgaaggatgaggtgcgcctgcagtatgagaagatgcac
cagatcttggacgaagacttgcggaagaccatggagatcctggacaaggcccaggccaaa
ttctgcaatgagaacgcagcccaggtcctgcatctcaatgagcgcatgcaggaggccaag
aagctcctcagctctgtccaggtcatgtttgacaaaactgaggatatcaatttcatgaag
aacaccaagtccgtgaaaatcctaatggacaggacccagaactgtactggtggcagcctg
cctccacccaaaattggccacctcaactctaagctcttcttgaacgagatcaccaagaag
gagaagcagctcaggaagctgctggaaggtcccctgagcacccccgtccccttcctgcag
agcatccccatgtacccgtgcaccgtcagcaactccggcgcggagaagcgcaagcactcc
actgccttccccgagggcagcttcctcgagccatcgtccgggactgtggccagccagtac
atgagccagggcgcgtcggccggcgaggggcagtccgcacaagccatggtgccttgtagc
tccacgcagcacattgtaggacttcccagcggcccgcagccggtgcactcgggctccgtc
ttcaacccatctcactaccccaacaccacgtcatctcagcagtccgtgctctcgcagtac
ggcgggcgcaaaatcctcgtctgctcggtggacaactgttactgttcctcggtgtccaac
cacagtgggcatcagccctacccacgctcggggcacttcccctggacagtctcctcacag
gagtactcccacccgctgccgcccgcgcccgccgtgccccagtcgctgccgggacttgcc
gtgcgggattggattgatgcatcccagcagcacggccggcaggatttctatagggtgtac
ggccagccctcggccaaacactacgtcaccagttaa
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