Lagopus muta (rock ptarmigan): 125694249
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Entry
125694249 CDS
T09141
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125694249 (CFAP43)
Cilium and associated proteins [BR:
lmut03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
125694249 (CFAP43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40
WD40_Prp19
Beta-prop_HPS5
CFAP43_N
WD40_like
WDR90_beta-prop_4th
DUF6016
Leuk-A4-hydro_C
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
125694249
NCBI-ProteinID:
XP_048803138
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Position
5:complement(54665634..54709640)
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AA seq
1367 aa
AA seq
DB search
MLDYIRREVQKKKGGKPKALQRTVVFTMVFCNEGLYTAGIEGILYLYRIRDLQYEMEICA
DISEPISTLIFSPDYTILLIITDQGTIYSYEPAHSGEAVKLLNAFSSYLLAADFLTPGDK
YCVSVTISGEVKVWLLENGTCLSVLNLDIEATAMACCPSSNSVAVGTKGGQIYFIDITKV
EAPRVVHRIFLSRFPVLSLHYDQSGQFLIIRAVEGYIFILDARPSKLFQVLGYVVLAGEV
LSLSVVSDFKNNVVEVMVLLNVAEIQQTRLEVFCLSSTLMEGIDKYANNQGMLNASAIKK
EQYDLEYPLSSAVRLKDNIVYGYCTCAPFICKYNLSKQSILEDPPVFLSEKVIPTNQFGS
GFICLSPNSRWLASAAKDGVLFIYDTSTMELLVQNYCHSYEGGGIRSVVFSPDGKFILVS
GESDGALVCLKWKKIKEMEVKEADLHWQSLLTILNKSISDENAVLRCMAGWQIESESTSE
SVPEEKSEKSPLEPSSAAVTEDGNLGNLHSDSTSEMTWLCQKTEKVIKEESERFANQKKE
IQMGIKKLHETIQKMMHENEQVPDIEKLGQQEFNLDMEEQERAQAEAEREVARIREKIEM
EILANCYLQDVIKHECWDSMCVKGRAVKCFHIACEVKNYPLKKRDEEELRTLEKVLHLRK
FEAANLKVQKKVLETKSEAVLFEEEENTGEVMAGDTASCCLDGSLSSQYGADTSILYHQL
DLHSREQKVNQIVLLKDIIYKVKTAFNKEFDIVAQQKEQEIARIKERNIRIREILGQLDL
QVEVWEPGLTCDEKPEQVFTVQDSEIKAEKYLTPQEREKAEMLARLEMERHLASLDSERQ
RALNDMMGGVLEVTQEDILKIDIPPPYFISKPEDEWNDQEKKIFRKYEEKVKELNEEKEK
YRRALKNEWEELEASIQETTQNFDKNVCKLFEKKVNLEKVIYQEELKIVNLIYSLMLDEE
LDSRKAGLCHFLVKKQKEKVKIARTVETTRKKIDFYTEQYDNAVAEDKNLEYGFRKNFAD
VPANLLDELLELYKCRPRSSSMSAEDFKDELTRLMKAMDELDNPEHMPNGLDPSIWESFC
LARRNKFKSEQLVKWMALILAEIEVFLQRRIDDNEKMSSKIEKIFQELTWLQEEKIKFQL
NLTFQFLLKQGQVEFESTEIPDYADAIFIKKSVIEELNCNIMDQVEKKIASMVECKEFSK
GIFQLEWEHKKMRMQIEDLNQKARDIATLPITKDRQLFLTMLDYDSHIAHRIAVMEQTLV
VMDKLHKKNMKKHQKRIKELEKCISLKEQANYELSLELKEMLVSVSERRHIYQAADMQHI
SERNAKRRYQEILKQKELRGLIEEQEKHLGILQAEAERLRSKTFPIL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgttggactacattcgtagagaagtacagaaaaagaaaggtggcaaaccaaaggccctg
caaagaacagttgtgtttaccatggtgttttgtaatgagggactgtacacagctggaatt
gagggcattttatacttgtatcgtatcagagatctccagtatgagatggaaatctgcgct
gacatctcagagcccatatccaccctcatattctctcctgattacacaatacttctgatt
attactgatcaggggacaatctattcttacgaacctgcccacagtggagaagctgtcaaa
ctcctgaatgcattcagcagttatttgctggctgccgatttccttactccgggggacaag
tactgtgtgtctgttacaatttcaggtgaagtaaaagtttggcttctggaaaatgggact
tgcctcagcgtgctaaaccttgatattgaggcaacggctatggcttgctgtccctcttca
aacagtgttgctgtaggaacaaaagggggtcaaatctattttattgacattaccaaagtt
gaagctccacgggttgttcacagaatttttctttccagatttccagtactatctttgcat
tatgatcagagtggccagttcctcatcattagagctgtggaaggttatatctttattcta
gatgctcggccttcaaaattattccaagttcttggatatgtagtgttggcaggtgaggtg
ctgagtctttcagtagtttctgacttcaagaacaatgtagttgaagtgatggtgcttctg
aatgtggcagagatccaacaaacaaggctggaagttttttgcctgtcatcaacactcatg
gaaggaattgataagtatgctaacaatcaaggaatgctaaatgctagtgccattaaaaag
gagcaatatgatctggagtaccctctgagttcagcagtcagactgaaggataacattgtt
tatggctattgtacctgtgcacctttcatctgtaaatacaatctctctaaacagagcatt
ttggaagatccaccagtatttttatcagaaaaagtaattcctaccaatcagtttggatca
ggattcatctgtttgtcacccaacagccgatggctggcttcagccgcaaaggatggtgtt
ttgttcatctatgacacttctaccatggagctacttgttcaaaactattgtcactcatat
gaaggagggggaatcagatctgtggtattttcaccagatggcaaattcatcctggtcagt
ggtgaaagtgacggtgccctggtgtgtctgaaatggaagaagataaaggaaatggaagtt
aaggaagctgatttgcactggcaatctcttcttactatattgaacaagtctatttcggat
gaaaatgctgttttaagatgtatggcaggatggcagattgagtcagaatccacatcagaa
tcggttccagaagagaaatctgagaagtcaccacttgaaccttccagtgcagcggtgaca
gaagatggaaaccttggaaatttgcattcagacagtactagtgaaatgacctggttatgt
cagaaaacagagaaggtcattaaggaagagtctgaaaggtttgccaaccagaagaaagag
attcaaatgggaattaagaagctgcatgaaactatccagaaaatgatgcatgaaaatgaa
caggtgccagatattgagaaactgggacagcaggagttcaacctggatatggaagagcag
gaaagagcacaagcagaggctgaaagagaagtggccaggataagggagaagattgaaatg
gagatcttagctaattgctacttgcaggatgtcatcaaacatgagtgctgggattccatg
tgtgtaaaaggacgggcagttaagtgtttccatatagcttgtgaagtgaagaattatccc
ctgaagaaacgtgatgaagaagagctgagaactttggagaaagttctgcacttaaggaag
tttgaagcagctaatcttaaggttcagaaaaaagttcttgagactaaatctgaggctgta
ttatttgaagaagaagagaatacaggagaagtcatggctggtgatactgcatcttgctgc
ctggatggaagtctgagttctcagtatggtgcagacacatctatactttaccaccaattg
gacttgcactccagggagcagaaagtcaatcagatagtattactgaaggacatcatatac
aaagtgaaaactgcttttaataaggaatttgacatagttgctcaacaaaaggagcaggag
atagcacgaattaaagaaagaaacataaggatccgagaaatcttgggacaacttgacctc
caagtggaagtgtgggagccaggtcttacatgtgatgagaaaccagagcaggtgtttact
gttcaggattcagagattaaagctgaaaaatacttgactccacaagagagagagaaagca
gaaatgctggccagacttgaaatggaaagacaccttgcttctctggacagtgaaagacag
cgtgctctcaatgacatgatgggtggagttctagaagtcacacaggaagatatcttgaaa
attgatattcctccaccttattttatatccaagcctgaagatgaatggaatgatcaagag
aagaaaatattcagaaaatacgaggaaaaagttaaagagctgaatgaagaaaaagaaaaa
tatagaagggcactgaaaaatgaatgggaggaacttgaagcttccatccaggaaacaaca
caaaactttgataagaatgtgtgcaaactttttgaaaagaaagtgaacttagagaaggtc
atctatcaggaagaactcaaaattgtcaatctcatttattctttaatgttggatgaggag
ttggacagtagaaaagctggactttgtcatttcctggtaaagaagcagaaagagaaagtc
aagattgcgagaacagtggagactacaagaaagaaaattgatttttacacagaacaatac
gataatgcagtagctgaagataagaatctggaatatggttttaggaagaattttgctgat
gttcctgctaatcttcttgatgaacttttggaactttacaaatgtcgcccaagaagttct
tcaatgtcagctgaagatttcaaagatgaactcacccgtttaatgaaagctatggatgaa
ctggataatcctgagcacatgcctaatggcttagacccatctatatgggaaagtttttgt
ctagctagacgaaataaattcaagagtgagcagctggtgaaatggatggccctaattctg
gcagaaattgaggtctttctccaaagaagaatagatgacaatgagaagatgagctcaaaa
atagaaaaaattttccaagaactcacttggctgcaggaggagaagataaaatttcaactg
aatttgactttccagtttttgctaaaacaaggacaggtagaatttgaaagtactgagatc
ccagattacgctgatgccattttcattaaaaagagtgttattgaagaactgaattgcaat
atcatggatcaagtagaaaaaaaaattgctagcatggtggaatgcaaagaattctctaag
gggatatttcagctggaatgggagcacaagaaaatgagaatgcaaatagaagatctgaat
cagaaagctcgggatattgcaacattacctattaccaaagatcgccagctattcctaacc
atgctggactatgatagccacattgcccaccgcatcgcagtgatggagcagactcttgtt
gtcatggataagctgcacaagaagaatatgaagaaacatcagaagagaattaaagagttg
gagaagtgcatcagtttaaaagagcaagcgaactatgagctgagccttgagctgaaggaa
atgcttgtgtctgtttcagaaaggaggcatatctatcaggcagctgacatgcagcatatt
tctgaaaggaatgcaaagcggcgttaccaggagattttgaagcagaaagagctgcgaggt
ctcatagaggaacaggaaaaacaccttggaattcttcaagcagaagctgaaagattaaga
tcgaaaacattccctattctttaa
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integrated database retrieval system
