Lagopus muta (rock ptarmigan): 125694257
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Entry
125694257 CDS
T09141
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125694257 (PIF1)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125694257 (PIF1)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125694257 (PIF1)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125694257 (PIF1)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125694257 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Viral_helicase1
Herpes_Helicase
UvrD_C_2
AAA_16
AAA_7
ABC_tran
Mg_chelatase
PhoH
SH3_13
Motif
Other DBs
NCBI-GeneID:
125694257
NCBI-ProteinID:
XP_048803177
LinkDB
All DBs
Position
5:10430238..10443101
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AA seq
602 aa
AA seq
DB search
MGDAELRCTAVVERPLPGGAGPLRRVLRGALVLLGRDELRQPVLRVAGGGGEAAAFSFAL
GGDAVRLFTRFVGEGRAAVRVGPGGAQVLLSDCPPDALRRFFRLLKLKLAAGPRGAPRQP
RLLGRPPPAFSVISPLQERDLRRDPERDRSGGERPAEVLRAERRPPARLSVEQEAVLGAV
RSGKSVFFTGCAGTGKSFLLKKIVGSLPPNSTYATASTGVAACHIGGTTLHAFAGIGSGK
APLEQCIQLAERPGVRQHWLACQRLIIDEISMVDGKFFDKLEAVARAVRKRDEPFGGIQL
IICGDFLQLPPVCKANEETTFCFQAKSWRKCIHVNMELTEVRRQTDKTFISLLSAVRLGR
CTEEVISLLTQTATNRSERDGILATRLCTHNDDVELTNERRLRQLSGDLHAFEALDSDPM
LVKLIDTQCPVGGRVELKVGAQVMLAKNLDVSQGLVNGARGVVVGFETEQKGLPKVRFLC
GVTRVIKLERWLFKGPSGIHLSRQQLPLKLAWAISIHKSQGMSLDSVEISLSRVFESGQA
YVALSRARSLAGLRVLDFDPKVVRADPTVLQFYRQLKRHQLQTQDSLRTHPDADEKENWK
CS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgcggagctgcgctgcaccgccgtcgtggagcggccgctgccggggggtgcg
ggccctttgcgccgcgtgctgcggggcgcattggtgctgctgggccgcgacgagctgcgg
cagccggtgctgcgcgtggccggcggcgggggagaggcggcggctttcagcttcgcgctg
ggaggcgacgccgtgcggcttttcacgcgtttcgtgggggagggccgcgcggcggtgcgg
gtgggcccgggcggcgcccaggtgctgctctccgactgcccacccgacgccctgcgccgc
ttcttccgcctcctgaagctcaagttggccgccgggccgcggggtgcgccgcgccagccc
cggctgctgggtcgcccaccgcccgccttctccgttatcagcccgctgcaggagcgcgac
ctgcggcgtgaccctgagcgggaccggagcggcggggagcggccggcggaggtgctccgt
gcagagaggcggcctcctgcccggctgtcagtggagcaggaggcagtgctgggtgctgtg
cgcagcgggaagagtgttttcttcactggctgtgcagggactgggaagtcattcctgctg
aagaagatcgtgggctccctccctccaaacagcacctatgctacagccagcactggagtg
gcagcttgccacattggtggcaccacactccatgccttcgcaggtataggctctgggaag
gctccgctggaacagtgcatccagctggcagagagacctggggtgcggcagcactggctg
gcctgccagcgcttaatcatcgatgagatctccatggtggatggcaagttttttgacaag
ctggaggcagtggcaagagcagtgagaaaacgagatgagccttttggaggaattcagctc
atcatctgtggggacttcttgcagctgcccccagtttgcaaggctaatgaagaaaccaca
ttctgcttccaggcaaaaagctggaggaaatgcatccacgtaaacatggagctgacggaa
gtgcgaagacagaccgataagaccttcatttcgctgctgagtgcagttcgtttaggcagg
tgcacagaggaggttatcagtctgctgacacagacagctactaacagatctgagcgcgat
gggatcctggctacacggctctgcacccacaacgatgatgtagaactgactaacgaaaga
cgcttgcgacagctttcaggagatttgcacgcttttgaggctttggacagtgacccgatg
ctagtgaagttaattgatactcagtgtcctgtgggtggtagagttgagctaaaggttgga
gctcaggtgatgctagctaagaatctggatgtgtctcaagggctggtgaatggagcacga
ggagttgttgtaggatttgaaactgaacagaaggggctgcccaaggtgaggtttctctgt
ggagtcactcgagttatcaaattggagaggtggctcttcaaagggccatcaggaattcat
ctgagtcgccaacagttgcccctaaaattggcatgggccatttccattcacaagagccag
ggcatgtctttagattctgtggaaatttccctgtctcgtgtctttgaaagtgggcaggcc
tatgtagccctttcccgagcccgcagccttgcaggtctccgtgttctggattttgaccca
aaagtagtgagagctgatcctacagtgctgcagttctatagacagctgaaacgtcaccaa
cttcaaacccaggattcactgcgcacccacccagacgctgatgagaaagagaactggaag
tgcagctga
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