Lagopus muta (rock ptarmigan): 125694338
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Entry
125694338 CDS
T09141
Symbol
SRP54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03060
Protein export
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
125694338 (SRP54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lmut02044
]
125694338 (SRP54)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
125694338 (SRP54)
Secretion system [BR:
lmut02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
125694338 (SRP54)
Eukaryotic Sec-SRP protein
125694338 (SRP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
DUF2209
AAA_33
SRPRB
nSTAND3
NPHP3_N
ResIII
MeaB
AAA_17
AAA_30
MobB
nSTAND_NTPase5
AAA_19
ATP_bind_1
PduV-EutP
APS_kinase
6PF2K
AAA_31
AAA_18
AAA_16
Zeta_toxin
AAA
Motif
Other DBs
NCBI-GeneID:
125694338
NCBI-ProteinID:
XP_048803319
LinkDB
All DBs
Position
6:35898019..35910820
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK
LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDTV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttctagcagatcttggaagaaaaattacttcagcgttgcgctcactgagcaatgct
acaattatcaacgaagaggttttaaatgctatgttaaaagaagtatgcacggcattactg
gaagctgatgttaatattaaacttgtgaagcaactaagagaaaatgtcaagtctgcaatt
gatcttgaagaaatggcatctggccttaacaagagaaaaatgattcagcatgctgtcttt
aaagaacttgttaaacttgtagatcctggagttaaagcatggacacctaccaaaggaaaa
cagaacattataatgtttgttggtttgcaaggaagtggtaaaacgacaacctgttcaaag
ttagcatacttctatcaaaggaaaggttggaagacgtgtttaatatgtgcagacacatac
agagcaggtgcttttgaccagttaaagcagaatgcaacaaaagcaagaattcctttttat
gggagttatacagaaatggatcctgtaattattgcatcagaaggtgttgagaaatttaag
aatgaaaactttgaaattatcatcgttgatacaagtggacgtcacaaacaggaagactcg
ttgtttgaagagatgctacaagttgctaatgccatacaaccagataatattgtgtatgtg
atggatgcttccattggccaagcttgtgaagctcaagctaaagctttcaaagatacagta
gatgtagcttccgtcattgtgactaagcttgatggacatgcaaaaggaggtggcgccctt
agtgcagttgctgctacaaagtctcctattatttttattggaactggtgagcacatagac
gacttcgaacccttcaaaacacagcctttcatcagcaaacttcttggcatgggtgatatt
gaaggattgatagataaggtaaatgaattaaagttggatgataacgaggcactcatagaa
aagctcaaacatggtcagtttacactaagagatatgtatgaacaattccaaaacatcatg
aaaatgggaccattcagtcagatcctgggtatgattcctggttttgggactgactttatg
agtaaaggcaatgaacaagaatcaatggcaaggctaaagaaattgatgactataatggac
agtatgaatgatcaagaacttgacagtacggatggtgccaaggtattcagtaagcagcca
ggaagaatccaaagagtagcaagaggttcaggtgtttctactagagatgtccaggagctt
ttgacccaatacactaaatttgcacagatggtgaaaaagatgggaggcatcaaaggactt
ttcaaaggtggtgatatgtccaagaatgtaaacccatcacagctggctaagctgaaccaa
cagatggcgaagatgatggatccaagagttcttcatcatatgggtggcatggcaggattg
cagtcaatgatgagacagttccaacaaggtgctgctgggaatatgaaaggcatgatggga
ttcaataatatgtaa
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