Lagopus muta (rock ptarmigan): 125694379
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Entry
125694379 CDS
T09141
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04519
Cadherin signaling
lmut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125694379 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125694379 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
125694379 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
lmut04990
]
PDZ domain-containing proteins
MAGUK family proteins
125694379 (PALS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125694379
NCBI-ProteinID:
XP_048803415
LinkDB
All DBs
Position
6:complement(28826190..28877650)
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDSEAKNVDLASPEEPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIILESPHYTVK
TLEVEELLTSLKHIQHVLVDPQSQEDISLILQLVQNTDFQNAFKIHNAVTVYMNKASPPY
PLISNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPVADE
KIYENVGTYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRSRRETEVAGRDYHFVSRQAFENDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaacggacacatcacagaagattctgatagtgaagcaaaaaat
gtggatcttgcatctcctgaggaacctcagaagcaccgagaaatggctgttgattgccct
ggagatttgggctccaggatgatgcccatgaggcggagtgctcagctggagcgaatccgg
cagcagcaggaggacataaggcgcagaagggaggaagagggaaagaaacaggaattggac
cttactgcttccatgaggcttaagaaattagcacagattcctccaaaaactggaatagac
aatccaatatttgacacagaagaagggattattttggagagtcctcattatactgtgaag
acactagaagtggaagaactattaacttccctaaaacatatccagcatgttttggtagac
cctcagagccaagaggatatctctctcatcttacagcttgttcaaaacactgattttcag
aatgcatttaagatacacaatgctgttacagtgtacatgaacaaagccagtcctccatat
cctctcatctccaatgcacaagaactagcacaagaggttcagagtgttttaaaacccagt
caccacaaggatgggcaggaacttaatgccttgctgaatgcccctcacatgcaggcactt
ctactagctcatgataaggttgcagaacaagaaatgcaacccgagcctgttgcagatgaa
aaaatttatgaaaatgttggcacgtatggaggggagacggttaaaatagttcgcattgag
aaagctcgagacattccattgggtgctactgttcgtaatgaaatggattctgtcatcatt
agtcgaatagtcaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttctggagatcaatggcattgagattcgtgggaaagatgttaatgaagtttttgattta
ctggctgacatgcatggcactctgacctttgtattgattcccagtcagcagagcaagcca
cctcctgcaaaggagacagttatacatgtgaaagcacattttgactatgatccttctgat
gacccttatgtcccctgccgagagttaggcctgtcttttcaaaaaggagatatactccat
gtcatcagccaagaagacccaaactggtggcaggcttacagagatggagatgaagataac
caaccactggcaggccttattcctggaaaaagttttcagcaacaaagagaagcaatgaag
caaactatagaagaagacaaggagccggagaaatcaggaaaactctggtgtgcgaagaag
aacaaaaagaaacggaagaaggttttatacaatgcaaataaaaatgatgattatgataat
gaagaaatattaacttatgaggaaatgtcactgtatcatcaaccagcaaacagaaaacga
cctattgttctcattggcccacagaactgtggccaaaatgaattgcggcagagacttatg
aataacgaagtggatcgctttgcctctgctgttccccatacaactcggagcaggcgggaa
actgaagtagctggcagggattaccattttgtttcccgacaagcatttgagaatgacata
gctgcagggaagtttattgaatatggagaatttgaaaagaatctttatggtactagtata
gactccgtgcggcaagtgatcaattctggcaagatatgccttttaaatcttcacactcag
tcactgaagacactacgtaattctgacttgaagccatatattatatttgtcgcgccacct
tcgcaagagagattacgtgctttgttggccaaagaagggaaaaatccaaagccagaagag
ttgagagaaatcatagagaagacaagggagatggaacagaacaatggtcactactttgat
acagcaattgtgaattctgatcttgataaggcttatcaagagttacttcggttaataaac
aaacttgacacagaaccccagtgggtaccctctacctggctacgatga
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