Lagopus muta (rock ptarmigan): 125694409
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Entry
125694409 CDS
T09141
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125694409 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125694409 (LRRC4C)
Cell adhesion molecules [BR:
lmut04515
]
Immunoglobulin superfamily
NGL family
125694409 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
125694409
NCBI-ProteinID:
XP_048803473
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All DBs
Position
6:complement(20331069..20802024)
Genome browser
AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPLESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcagcttcttgtggtagctggt
ctagtgagggctcaaacttgcccttcagtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaacctacatgagaaccagatccaaatcattaaggtgaatagcttcaagcatctgagg
cacttagaaatactgcagctcagcaggaatcacatcagaacaattgaaataggggccttc
aatggtctggccaatcttaatactttggaactctttgacaatcgtctgaccactatccca
aatggagcttttgtatacttatcaaaactgaaggaactttggttgagaaacaaccccatt
gagagcataccctcttatgcttttaacagaatcccttctctccggagactggatttggga
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttaaga
tatttgaaccttgccatgtgcaatctgcgagagattcctaacctcaccccacttgtaaaa
ctggatgagttagacctttctggaaatcacttgactgccatccggccaggttccttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcaatcacttgtggagatcaatctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccacttcgtctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tctaatactgcatgctgtgcccgttgccacacacctcccagtttgaaaggaaggtacatt
ggtgagctggatctgaactacttcacgtgttatgctccagtcatagtggagccaccagca
gacctgaacgtcactgaaggcatggctgcagagatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaatggatctgttatgacacatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtatacatgcatggtgagtaactctgttgggaataccacagcttctgccacactg
aatgtgactgccctggataaccccggctatacatatttttcaactgtcacagtggagact
gtggaaccttctcaggatgaggcacagacaacagagcaggttgggcccacaccagttacc
aactgggagaccactaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacggacgcaaacaacgggatcccaggaatagatgaggtt
atgaagactactaaaatcattattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcaaaaccatcatgctcca
acacggactgtagaaattataaacgtggatgatgagcttacaggtgacacacccttagag
agtcacttgcccatgccagcaattgagcatgagcacctaaatcactataactcttataag
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttactgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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