Lagopus muta (rock ptarmigan): 125694456
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Entry
125694456 CDS
T09141
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
125694456 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125694456 (RAG1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125694456 (RAG1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125694456 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Fusion_F0
Motif
Other DBs
NCBI-GeneID:
125694456
NCBI-ProteinID:
XP_048803676
LinkDB
All DBs
Position
6:19348857..19358527
Genome browser
AA seq
1042 aa
AA seq
DB search
MSITSQMDLPEEIQHPYAKFSEWKFKLFKVRPFQKAPSDKSQCINKDQEQEVASTDKNIV
LHKDEEVPRGEKLILTQMDFMGNTQALEKDVNDMKIQDNTIHQNNLKQLCRICGASFKTD
CYKRTHPVHGPVDDETLWLLRKKEKKATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWS
IIHRKFSNTPCEVYFPRNSTMQWKPHSTNCEVCHAPSRGVKRKSQPSNVIHGKRVKIIAE
RARVNKGIKNQVLINNKKVMKEITNCKNRHLSTKLLAVDYPADFIKSISCQICEHILADP
VETTCRHLFCRACILSCIKVMGSYCPSCWYPCFPTDLVTPVKSFLNILDSLSIRCPVPEC
DEEILHGKYGQHFSNHKEMKDKELYNPINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAF
AEKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGKGSGLHPAVCLAIRINTFLSC
SQYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGL
SGLPLSIDDYPIDTIAKRFRYDTALVSALKDMEEEILEGMKAKNLDDYLNGPFTVVVKEC
CDGMGDVSEKHGSGPAVPEKAVRFSFTVMNIAIDHGNERIRIFEEVKPNSELCCKPLCLM
LADESDHETLTAILSPLIAEREAMKNSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGL
EASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKG
VSAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDASKEERKRWQLTLDKHLR
KKMKLKPMMRMSGNFARKLMSRETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCP
AKECPELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWAS
EGNESGNKLFRRFRKMNARQSKFYEMEDVLKHHWLYTSKYLQKFMNAHKTLRSQGFVIDP
DDGSGDSLPPEISLESSDSVEL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacatcacaaatggatctacctgaagagattcagcatccatatgcaaaattt
tctgaatggaaattcaagctgtttaaagtgagaccatttcaaaaagcaccttctgataaa
agccaatgcataaacaaggatcaagaacaagaggtagcttctacagacaaaaacatcgta
ctgcataaagatgaagaagttccaagaggagaaaagttaattctgacacagatggacttc
atgggcaacacgcaagcacttgagaaagatgtcaatgacatgaaaatacaagacaacaca
attcaccagaacaacctgaagcaactttgccgcatctgtggagcttcatttaaaactgat
tgctacaagagaactcatccagtacatggaccagtagatgatgaaactctgtggcttctg
agaaagaaagagaaaaaagcaacctcttggccagatcttattgcaaaagttttcaagatt
gatgtgagaggggatgttgacactatccatcccactcgattttgtcacaactgctggagt
attatccacaggaaattcagtaatactccatgtgaagtttattttcctaggaacagcacg
atgcagtggaagccccactctacaaactgtgaagtgtgccacgctcccagccggggagtc
aagagaaaaagccaaccatccaatgtaatacatggcaaacgtgtgaaaatcattgcagaa
cgtgctcgagttaacaaaggcataaagaatcaagtgctgataaataacaaaaaggtaatg
aaagagattaccaactgcaagaacagacatctcagcaccaagcttcttgcagttgattat
ccagcagatttcattaaatccatctcttgccagatctgtgagcatattttggcagaccca
gtggaaacaacatgtagacacttgttttgcagagcttgcattctcagttgcatcaaagtt
atgggcagctattgcccctcctgctggtatccttgtttccctactgatctggtaacccca
gtgaaatccttcctgaacatccttgatagcctgagcataagatgccctgtaccagaatgt
gatgaagagatcttgcatggaaaatatggccaacacttctctaaccacaaggagatgaaa
gataaagagctctataaccccataaataaaggtggtcgaccaaggcagcatcttctgtct
ttgaccagaagagctcagaaacatcgtctgagagaactgaaacgtcaagtcaaggctttt
gctgagaaagaagaaggtggtgatataaaggctgtatgcatgactttgttcctgctagct
ttaagagcaaaaaatgagcacaagcaagcagatgaattggaggctataatgcaaggcaaa
ggatctggacttcatcctgctgtttgcctggcaatccgaatcaacacatttctcagctgt
agccaatatcacaaaatgtaccgaactgtaaaagctgtcactgggaggcagattttccag
ccactgcatgctcttcgcactgccgagaaagccctcttaccaggttatcatccttttgaa
tggaaacctccattgaaaaatgtatccactaacacagaagtgggaattatagatggacta
tcaggactacccctctcgattgatgactacccaatagacacaattgcaaagagatttcga
tatgatacagccttggtttctgctttaaaggacatggaggaagaaatcttggagggcatg
aaggcaaaaaatctggatgactatctgaatggtcccttcactgtggtagtaaaagagtgc
tgtgacggaatgggagatgtcagcgagaagcatggaagtggtcctgcggtcccagagaag
gctgtacgcttttcatttacagtcatgaacattgctatagaccatgggaatgaaaggata
aggatctttgaagaagtaaagcccaattcagagctgtgttgcaaacccttgtgccttatg
ctggctgatgaatcagaccatgaaactctgacagcaatcctgagccctctcatagcagaa
agagaagctatgaagaacagtgaactgcttcttgaaatgggaggcatcctgagaacattc
aaattcatctttcgaggtacaggctatgatgagaaacttgtaagggaagtggaagggctg
gaggcctcaggttccacttatatctgtaccctctgtgatgcaacccgcctagaggcctct
cagaatttggtcttccactccatcaccaggagccacgctgaaaatctggagcgatatgaa
atatggaggtccaacccatatcacgaatctgttgatgagctccgtgacagagtgaagggt
gtttcagccaaaccttttatagagactgttccctccattgatgcattgcactgtgacatt
ggcaacgcaacagaattttacagaattttccagatggagattggtgaagtctataagaat
cctgatgcatctaaagaggaaaggaagaggtggcagttgactcttgacaaacatctcagg
aagaagatgaaattaaaacctatgatgaggatgagtgggaactttgctaggaagctcatg
tccagagaaacagtagaggcagtgtgtgaattaataaagtgtgaggaaaggcatgaagcc
ctaaaagaactaatggacctttatctgaaaatgaaaccagtatggcgatcttcgtgccct
gccaaagagtgtccagaattgctgtgccagtacagctacaattcacagcgttttgctgag
ctcctgtctacaaagttcaaatacagatatgagggcaagattaccaattattttcacaaa
acccttgctcatgtacctgaaatcattgaaagagatgggtccattggtgcttgggcaagt
gaaggaaatgagtctggaaacaaactattcaggagattccgaaaaatgaatgccaggcag
tccaaattctatgaaatggaggatgtcttaaagcatcactggctatatacttctaagtac
ctccagaagttcatgaatgctcataaaacgttaagaagtcagggcttcgtgattgatcca
gacgatgggtcaggtgattctttgccaccggagatctctttggaaagcagtgattcagtg
gaactctaa
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