Lagopus muta (rock ptarmigan): 125694509
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Entry
125694509 CDS
T09141
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125694509 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125694509 (CAPN3)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
125694509 (CAPN3)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C2: calpain family
125694509 (CAPN3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
125694509
NCBI-ProteinID:
XP_048803814
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All DBs
Position
6:25488466..25516325
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AA seq
810 aa
AA seq
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MPSAINAAVAQQAAAGSVPSTTSTTTEGTGGGTGGIYSAIISRNQPIIKVKEKTYEELHK
KCLEKNILYEDPDFPPNETSLFYSQKVPIKFEWKRPREICENPRFIIGGANRTDICQGEL
GDCWFLAAIACLTLNKKLLCRVIPHDQSFIHNYAGIFHFQFWRYGDWVDVIIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAIARGSLMASSIDDNLGFSYGAAPRSDIREMIARMVKNLENAQMSHSTVDHQ
GTDERPAWTIMPMQYETRMSCGLVKGHAYSVTAVEETTFKGEKIRLIRLRNPWGQVEWNG
PWSDKSEEWNFIKEEEKIRLQHKIAEDGEFWISFEDFMRHFTKLEICNLTPDTLEADKLQ
TWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQK
NRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISERF
RLPPSEYVIIPSTYEPHQEGEFILRVFSEKRSLSEEVENMIEADRPSKKKKGKPIIFVSD
RANSNKELTTHEDAGKDGEKTHVDEKKRSSAKAREKSEEETQFRNIFQQIAGDDMEINAE
ELRNVLNNVVKKHKDLKTEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKIF
KHYDADHSGTINSYEMRNAVKDAGFRLNNQLYDIITMRYADKNMNIDFDSFICCFVRLDA
MFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgccataaatgcagcggtggctcagcaggcagctgccgggtcagttcctagc
actaccagcacaacaactgaaggtacagggggaggcacaggagggatttattctgccatt
ataagtcgcaaccagcccattatcaaagtaaaggaaaagacctatgaagagcttcacaag
aagtgtctggagaaaaacattctctatgaggatcctgatttcccacctaatgagacttcc
ctcttctacagccagaaagtccccatcaagtttgaatggaaaagaccacgtgaaatttgt
gagaatccacgatttattattggtggagccaacagaacagatatctgccaaggagaatta
ggcgattgctggttcctggctgccattgcttgcctgacactgaataaaaaactgctctgc
agagtcatacctcatgaccagtccttcatacacaactatgctggcatctttcacttccag
ttttggcgctatggagactgggtggatgtcatcattgatgactgcctacccacatacaac
aaccagctggtcttcaccaaatcctcccagcgcaatgagttctggagtgctctcctggaa
aaggcctatgcaaaactccatggatcctatgaagctttgaaaggaggcaacaccacggag
gcgatggaggatttcactggaggggtgacagagttctatgagataaaggatgctcctaaa
gatatctataaaatcatgaaacatgccattgccagaggatccctcatggccagctccatt
gatgataacctaggcttttcctatggagcagctcctcgaagtgacattagagaaatgatt
gctcgaatggtgaagaatctggaaaatgcacagatgagtcactccactgtggaccaccag
gggacagatgaaaggccagcctggactataatgccaatgcagtatgaaactcggatgtct
tgtgggctggtcaaaggtcacgcatactcagtcacagctgtggaagagacaacatttaaa
ggggaaaagatacgtctgataaggctgagaaacccgtggggacaggtggagtggaatgga
ccttggagcgataaatcagaagagtggaacttcattaaagaagaagagaaaattcgcctg
caacacaagattgcggaagatggggaattctggatatcgtttgaagattttatgaggcat
ttcacaaaacttgagatctgtaacctcacacctgatactttggaagctgataagcttcag
acctggactgtgtcagtcaacgaaggacgctgggtgagaggctgctcagctggagggtgc
cgcaattacccagatacattttggaccaatccccaatatcgcttgaagctcctagaggaa
gatgatgatcctgaagatgaagaggttatctgcagcttcctggtagcactgatgcagaaa
aacaggaggaaagaacgcaagctgggagccaacctctacaccattggctttgccatctat
gaggtacccaaagagatgcacggtactaagcaccacttgcaaaaggattttttcctctac
aatgcttccaaagctagaagtaagacctatataaacatgcgagaaatctctgagcgcttc
cggctgcctcccagcgagtatgtcatcatcccatccacatacgaaccccaccaggaggga
gaattcatcctgagggttttctcagagaaaagaagtctttcagaggaggttgaaaacatg
attgaggcagatcgcccatcaaagaagaaaaaaggcaagcctatcatctttgtttctgac
agagcaaacagcaataaggagctgacaacacacgaagatgctggcaaagatggtgaaaaa
acccacgtagatgagaaaaagcggtcttcagcaaaagctcgtgagaagagtgaagaggaa
acacagttcaggaatattttccaacagattgcaggggatgacatggagatcaatgccgaa
gaactcaggaatgttctcaacaacgttgttaaaaaacataaggacctaaagacagaagga
tttgaactagaatcttgccgcagcatgattgctttgatggatacagatggctcagggaag
atcaactttgatgagttccgacacctctgggacaaaatcaaaagctggcagaaaatcttc
aagcattacgatgctgaccattcaggaaccattaacagctatgagatgcgcaatgcagtc
aaagatgcagggtttcggctgaacaaccagctctatgacatcatcacgatgcgctacgct
gacaagaacatgaacatcgactttgacagcttcatctgctgctttgtgagactggatgct
atgttcagggcattccacgccttcgataaagatggagatggaatcataaaactcaacgtc
ctggagtggctgcagctcaccatgtacgcctaa
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