Lagopus muta (rock ptarmigan): 125694531
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Entry
125694531 CDS
T09141
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125694531 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125694531 (ABCC8)
Transporters [BR:
lmut02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
125694531 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_23
ABC_ATPase
AAA_29
RsgA_GTPase
MMR_HSR1
nSTAND1
AAA_25
TMD0_ABC
TraD_N
AAA_15
AAA_7
Motif
Other DBs
NCBI-GeneID:
125694531
NCBI-ProteinID:
XP_048803868
LinkDB
All DBs
Position
6:complement(11790291..11857233)
Genome browser
AA seq
1614 aa
AA seq
DB search
MCPEAEAAPGCVQGPVMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYILLNEAFEAQKNKRPSSPQGS
GSIWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTKILGVF
FISSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMQLST
SNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGISALIGA
AVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEE
TRQKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFASLSLFH
ILVSPLFLLSSVVRSTVKALVSVQKLSEFLSSDEIEEHDKCPELRSADAQSKYQAVPLKV
VNRKRPAREEWNNYTSHTRRPINITEPDDFCVKITNGFFTWTPEGPPALSNIDIRIPQGQ
LTMIVGQVGCGKSSLLLAILGEMQKISGNVSWSSCTSDSEMGEDISPEKESPVEMEFRKR
GSVAYASQKPWLLNATVEENITFESSFNKQRYKAVIDACSLQPDIDILPHGDQTQIGERG
INLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTVVLV
THKLQYLPHADWIIAMKDGYIQREGTLKDIQKSETELFEHWKTLMNRQDQELEKETTIET
KTVLERTNLRRTMYSREALLKDDEEDEEEATESDDEDNLSSVLHQRAKMPWRACGKYLSA
AGILLLPLLVLSQLLKHTVMVAIDYCLARWTSDAISEKMEVELKNCSHCEVFNHSPYSKI
FSILCCLGIVLCLVTSIAVEWTGLKVTKKLHASLLNKIILAPMRFFETTPLGSILNRFSA
DCNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALVPLAIMCYFIQKYFRVASR
DLQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFLTAANRW
LEVRMEYIGACVVLIAAVTSITSCLYSKLSSGLVGLGLTYALMVSNYLNWMVRNLADMEI
QLGAVKRIHGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVNA
HISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIILQ
DPILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQR
QLFCLARAFVRKTSIFIMDEATASIDMATFDFLKQTKLWKVSCSRQWRENILQKVVMTAF
ADRTVVTIAHRVHTILNADLVIVMKRGLILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccggaggcggaggctgcgccgggctgcgtgcagggtcccgtcatggccctggcg
ttctgcggcgacgagggcaactccaccgcttacaacgtggaccacggcgtgctcaacaac
ggctgcttcgtggacgcgctcaacgtggtgccgcacgtcttcctgctcttcatcaccttc
cccattctcttcatcggatggggaagtcagagctccaaagtccatatccatcacagcaca
tggcttcattttcctggccacaatctccgctggattctaacttttatccttctgtttgtg
ctggtgtgtgaaattgcggagggcatagtgtctgatggggtttcagaatcccgccattta
cacctgtacatgccggctgggatggcgttcttggcagccatcacgtctgttgtctattac
cataacattgaaacatccaattttccaaagctattaatcgctttgttgttctactggact
ttagctttcataactaaaaccatcaaatttgtaaagttctgtgataatggagttggattt
tctcagcttcgattttgcctcacaggactgctggttgttctatatggaatgctactggct
gtagaaataaatgtaatcagagtgaggagatacgttttcttcaaaactcctaaagaagtt
aaacctcctgaggatctccaggaccttggtgttcgattcctacagccgtttgtgaacctg
ttatccaaaggaacatattggtggatgaacacattcatcaagaccgcccataaaaagcca
atagacttgaaaaccataggcaagcttcccattgccatgagagctctgaccaattacatt
ctccttaatgaggcttttgaagcacagaagaacaaaaggccatcttctccacagggatcc
gggtcaatttggcgtgctctctgctgtgcttttgggagacccttacttctcagtagcaca
ttccgtattctggctgacttgcttggcttcgctggtcccctctgcatctctgggattgtt
cacaatgttggaaaaggaaataacactatccgcccacagactaaaattcttggtgttttc
ttcatttcatctcaagagttcctgtccaatgcatatgttttggctgtactcctgtttttt
gccctactgttgcaaaggacgtttctccaagcatcatactatgttgctattgaaacggga
atcaacttgagaggtgcaatacagacaaaaatatacaataagattatgcagctttcaact
tctaacatgtctatgggggagatgactgcaggccagatctgtaatttggttgccatagac
acaaaccagttgatgtggttctttttcctctgccctaacctttgggctatgccagtacag
ataattgtaggagttcttctcctctactaccttctaggaatcagtgccttaattggagca
gcagtaatcatagtacttgcgcctgttcagtacttcgtagcaacaaaactctcacaggcc
cagagaagcacattggagtactccaatgagagactgaagaagacaaatgagatgctccga
ggcattaagctccttaaactctatgcttgggaacacatctttcacagcagtgtggaggaa
accagacaaaaagaaatgactagcctcaagtcttttgccctttatacctctatatctatc
tttatgaatgcagcaataccaattgcagctgtgcttataacatttgtggtccatgctcat
ctgacaagaaaggctgacttctctccatctgtggcatttgcctccctctccctgtttcac
attctcgtgtctccactgttcctgctctccagtgtggttagatcgactgtcaaagcatta
gtaagtgtgcagaaactgagtgaattcctgtcaagtgatgagattgaagaacatgataaa
tgtccagagctaagaagtgcagatgctcagagcaaatatcaggcagtgccactcaaagtg
gtgaaccgcaagaggcctgccagggaggagtggaacaattacacctctcacacaagaaga
ccaattaacatcacagaaccggatgatttttgtgtaaagattacaaatgggttcttcact
tggacacctgaaggtcctccagcattgtccaacattgatatccgaatccctcaaggtcag
ctaacgatgattgtaggacaagttggctgtggtaagtcatctctcttgttggccatactt
ggtgagatgcagaagatctctggcaacgtatcctggagcagctgcacttctgacagcgag
atgggggaagatatcagcccagagaaagaatctcctgttgaaatggaattcaggaaaaga
ggatcagtagcatatgcatcacagaagccttggctgctcaacgccacagtggaagagaat
atcacatttgaaagctctttcaacaaacagaggtacaaagcagtaattgatgcttgttcc
ctccagcctgatattgacattctccctcacggagaccaaactcagattggagagaggggt
attaatttgtctggagggcagcgccagcgtatcagtgtggcaagggcactgtaccagcag
acaaatgttgtgttcctggatgatccattttctgcactggatattcacctgagtgaccat
ctcatgcaagaaggaatcctgaaaatgctacgagaagacaagcgtacagttgtgctggtg
acccacaaactgcagtacttgccccatgctgactggataatagcgatgaaagatggctac
atccagagagaaggaacactcaaggacatacagaaatctgagactgagcttttcgaacac
tggaagacactaatgaatcgacaggaccaggagctggagaaggagactacaattgaaact
aaaactgttctggaaagaacaaatctccggaggactatgtattcccgtgaagcactgttg
aaagatgatgaagaagatgaagaagaagcaacagaaagcgatgatgaagacaacctgtcg
tctgtgctacatcagagagcaaagatgccttggagagcatgtgggaagtacctcagtgca
gcagggatactcctcctgccactgctggttctgtcccagctgctgaagcacacggtgatg
gtggccattgactactgcctggcgcgctggacttcagatgccatttctgagaagatggag
gttgagctgaaaaactgctctcactgtgaggttttcaaccactctccatattcaaaaatt
ttcagcattctctgctgccttgggattgtgttatgtcttgtcacatccatagcagtggag
tggactggcttgaaagtcaccaaaaagctgcacgcttctttattgaataagattattttg
gcaccaatgaggttttttgaaacaacacctctgggaagtatattaaacagattttcagct
gattgcaacaccatcgaccagcatattcctgccaccctggagtgtttgagtcgctccact
ttgctgtgtgtatctgctctggccgtgatttcgtacgtcacaccaatgtttctcattgcc
ctggttccccttgcaatcatgtgttacttcatccagaaatacttccgagtcgcatcacgg
gaccttcagcagctggatgacagcactcagctcccattactttcccatttttcagagact
gttgaaggcctgaccaccatccgagccttcaggtatgaagctaaatttcgacagaagctt
cttgaatacacagattccaacaacattgcttcccttttccttacagctgctaatcgctgg
ctggaagtccgcatggagtacattggagcatgtgtggtactcatagcagctgtcacttct
attaccagttgcctgtatagtaaactctcttcaggacttgtaggcttgggactaacctat
gctcttatggtgtctaactatctgaattggatggttcgtaacctggctgacatggagatc
cagctgggtgcagtgaaaagaatccatggccttctcaaaacagaagctgaaaattacgaa
gggcttctttcgtcctcacagattcctcagaactggccagacagaggcgagatccaaatc
cagaaccttagtgtccgatatgacagcaacctaaagccagtgctaaagcatgtcaatgct
cacatttctccaggacaaaagattgggatctgcggccgaacaggcagtggaaaatcttcc
ttttctcttgcatttttcagaatggttgacacttttgagggaaggattatcattgatggc
atagatatcgctaagctccccttacagacgttgagatccaggctgtcaatcattctccaa
gatcctattttattcagcggaacaatccggtttaacttggaccctgagaagaagtgcact
gacagcatgctgtgggaagcgttggaaatagctcagctcaagcatgtggtgaaggcactg
cctggaggcctagatgctattgtcacagaagggggtgaaaacttcagccagggccaaagg
cagctgttctgcttagcgagggctttcgtgcggaagaccagcatcttcatcatggatgaa
gccacagcatctattgacatggcaacctttgatttcctaaagcaaacaaagctttggaag
gtcagctgcagtcgtcagtggagggagaacatactccagaaggtggtcatgactgcgttt
gctgatcgtactgtggttacaatagcacaccgcgtgcacacgatcctgaatgcggatttg
gtcattgtaatgaagagagggcttattttggagtatgacaaacccgaggttctgctggaa
caagaagacagtgtatttgcttcttttgtacaagcagataagtaa
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integrated database retrieval system
