Lagopus muta (rock ptarmigan): 125694576
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Entry
125694576 CDS
T09141
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125694576 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lmut01007
]
125694576 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125694576 (CARS1)
Enzymes [BR:
lmut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
125694576 (CARS1)
Amino acid related enzymes [BR:
lmut01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125694576 (CARS1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125694576 (CARS1)
Prokaryotic type
125694576 (CARS1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Coat_F
Motif
Other DBs
NCBI-GeneID:
125694576
NCBI-ProteinID:
XP_048804000
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All DBs
Position
6:12996610..13032385
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AA seq
830 aa
AA seq
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MAAAPAEQASSYSFILSISEEEARVKALNEYLSTRSYIQGFTFSHADVEVFRKFSGPPVD
QYFHVVRWYRHIEAIYDGSSEKNDPCKLQTSKGKRMQPPWSPPEGTKHSRLCLYNSLTRN
KEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKFDVFYCMNITDI
DDKIIKRTRQNYLFEQYRKNKSTPAQLLEDVKTASELFSVKLSETTDPDKRQMLEKIQNA
VKSAFDPLQEAVQAKLPAEEISRCHEILLEEAKDLLSDWLDSKFGSQVTDNSIFSELPKF
WEGEFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGYVSNGSVYFDTVKFDSS
KKHSYAKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWG
KGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDNWVRYFLHTG
HLTIAGCKMSKSLKNFITIKDALKKHTARQLRLAFLMHSWKDTLDYSSNTMESAIQYEKF
MNEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFYDRKAAIHEALCDNVDTRSVLEEM
RSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQMLKIFGAVESDDAIGFPVGGNSQNI
NIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPELGVRFEDHEGLPTV
VKLVDKDTLLREREEKKKIEEEKKRKKEEAARKKQEQEAAKLAKMKIPPHEMFKSEHDKY
SKFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQNGSAN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccccagccgaacaggcttccagctacagttttattctgagcattagtgaa
gaggaagccagggtgaaggctttgaacgagtacctgagcactcgtagttatatccagggg
ttcacattttcacatgcagatgtggaggtgttcagaaagttttcggggccacctgtggac
cagtatttccatgttgtccggtggtacagacacatagaagcaatctatgatggcagcagt
gaaaaaaatgacccttgtaaacttcaaacaagtaaaggcaaacgtatgcagcctccttgg
tctcctcccgaagggacaaaacattctagactctgcctctacaacagcctgactcgcaat
aaggaaatatttcagccgcagaatggaaaaaaagtcacgtggtattgctgtggtccaaca
gtatacgatgcttctcacatgggacatgccaggtcatacatctcatttgatatcctgaga
agaatcttaagggattattttaaatttgatgttttctattgtatgaatatcacggatatt
gatgataagatcattaagagaacaagacaaaactacctttttgaacagtataggaagaac
aaatcaacaccagctcagctacttgaagatgttaaaactgcctcagagctcttttcagtt
aaattaagtgagacaacagacccagataaaaggcagatgttggaaaaaattcagaatgca
gtgaagtctgcttttgaccctctacaagaagctgtgcaagcaaaactccctgcagaagag
atcagcagatgtcatgagatactattggaagaagccaaagatttactgtctgactggctg
gattcaaaatttggcagccaagtgactgacaattccatattctcagagctccccaaattc
tgggaaggggaatttcataaagacatggaagctctcaacgtcttacctccagatgtttta
acgcgggttagtgaatatgtgccagaaattgtggcatttgtgaaaaagattgtggataat
ggttacgggtatgtgtccaatggatctgtatactttgatactgtgaagtttgattccagt
aaaaaacactcctatgctaagttggttcctgaagctgtgggtgatcagaaagctcttcaa
gagggtgaaggtgatctgagtatctcagctgatcgcctatgtgagaagcattctccaaat
gattttgctttgtggaaatcctccaagccaggagagccctcatgggactctccatgggga
aaggggcggccaggttggcacattgaatgttctgcaatggctggatccattctgggagag
tcgatggacattcatggaggagggtttgatctccgatttcctcaccatgacaatgagctg
gcacagtctgaggcgtactttgaaaatgataactgggtgcgatattttctgcatactggc
cacttaacaatagcaggctgtaaaatgtccaaatctttgaagaattttatcactataaaa
gatgcactgaagaaacatacagcacggcagttacgattggctttcctcatgcattcttgg
aaggatacactggattattcaagtaataccatggagtcagctattcagtatgagaagttt
atgaacgagttctttttaaatgtgaaggatattcttcgagctcccactgatgtgacaggc
cagtttcagaaatgggaaaatcaggaagcagagcttaacaaaaatttttatgacaggaag
gcagcgattcatgaagcactctgtgacaatgttgacactcgctctgtattagaagaaatg
cgttcgttagtcagtcagtccaactcctatattgctgcaaagaaatctgccagacaaatg
ccaaacagacttcttttagaaaacatcagttgctatctcacccaaatgctaaagattttt
ggtgccgtagaaagcgatgacgcaattggttttcctgttggaggaaatagtcaaaacata
aatattgaatcgactgtgatgccatacctacaagttctttctgagtttagagaaggagtg
cgacaaattgccagagagaaaaaagtaactgaagtgctgcagttgagcgatgctcttcga
gatgacatccttcctgaacttggtgttcgatttgaagatcatgaaggacttccaaccgtg
gttaaactagtggataaagacacattactgagagaaagagaagaaaagaaaaagattgaa
gaagagaaaaaaaggaagaaagaagaagcagccagaaaaaaacaagagcaggaagcagca
aaactggcaaaaatgaagattccaccccatgaaatgtttaaatcggaacatgacaaatat
tccaagtttgatgaaaatggatttcccacgcatgatacagaaggcaaagaactcagcaaa
ggacaaattaagaagctaaagaaactttatgagacccaagaaaaactatacaaggaatat
ctacaaatggtgcagaatggaagtgcaaattga
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