Lagopus muta (rock ptarmigan): 125694616
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Entry
125694616 CDS
T09141
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125694616 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125694616 (SLC6A5)
Transporters [BR:
lmut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125694616 (SLC6A5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125694616
NCBI-ProteinID:
XP_048804110
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Position
6:complement(4374330..4399799)
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AA seq
786 aa
AA seq
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MNRQAVNSPETVPPGPNEGAGVTRISPENEQQNAPLQPPAAMARLPRSLSNDYKTLLSEE
TKQNDLERTKVGICKLSSTPVQANSTLQRESAETFPYKQVAGAAAAGQAVIPHCKIAALQ
STDGDGNPALGKSTLEQNNAKSTWVTLSQSTVVLGTDGNTSVLPGRVEGEDDIGDENKAR
GNWSSKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIPYLMMLALAGIPIFFLEVSL
GQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIILCYTLFYLFASFVPVLPWASC
NNPWNTPDCKDKNKLLLDSCIIGDHPKIQIKNSTFCMSAYPNLTMVNFTSEGNKTFVSGS
EEYFKYFVLKISAGIEYPGEIRWPLALSLFLAWVIVYASLAKGIKSSGKVVYFTATFPYV
VLIILLIRGVTLPGAGAGIWYFITPKWEKLIDAMVWKDAATQIFFSLSAAWGGLITLSSY
NKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANELKVNIEAVADQGPGIAFVVYP
EALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRTHKALFTLGCCI
SFFIMGFPMITQGGMYMLQLVDTYAASYSLVIIAIFELVGVSYIYGLQRFCEDIEMMIGF
QPSKFWRVCWAFVTPTILTFILCFSFYQWEPMTYGAYHYPGWSMVLGWLMLACSVIWIPV
MFVIKMHLAPGKFIERLKLVCSPQPDWGPFLAKHRGERYMNMIDPLGTSSLGLKLPVKDI
ELGTQC
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaggctgtgaacagtcctgaaacagttcctcctggaccaaatgaaggtgca
ggagtcacaagaatcagccccgaaaacgagcagcagaacgccccactgcaaccccctgcc
gccatggctaggctcccacgatcgctctccaacgactacaaaacgcttctctccgaagaa
accaaacaaaatgatttggagaggacgaaagtcggaatctgcaagctcagcagcaccccg
gtgcaagccaactccacgctccagagggaatctgctgagacctttccgtacaagcaggtg
gccggggcagcggctgccgggcaagctgtgatccctcactgcaaaatcgccgctttgcaa
agcacggacggggacggtaacccagctctgggtaagagcacgctggagcaaaacaatgcc
aaaagcacctgggtgaccttgagccagagcaccgtggtactgggtacagatggcaacacc
tctgttcttcctggcagagtggagggggaagacgatataggggatgaaaacaaagcccga
gggaactggtccagcaagctggatttcatcctctccatggtgggttatgcagtggggctg
ggcaatgtctggaggttcccgtacctggcctttaagaatgggggaggtgccttcctcatc
ccctacctgatgatgctggctcttgccggcatccccatcttctttctggaggtctccctg
gggcagttcgctagccagggccccgtctcggtgtggaaagctatccccgccctgcaaggc
tgcggcatcgcgatgttgatcatctccgttctgatagccatatattacaacattatcctg
tgctacactcttttctacctttttgcctcctttgtacccgttctcccttgggcgtcctgt
aacaacccctggaacacgccggactgtaaagacaaaaacaagcttttactggattcatgc
atcattggtgaccatccaaaaatacaaatcaagaactctactttctgtatgagtgcctat
ccaaacttgactatggttaactttaccagtgaaggaaataagacatttgtcagtggaagt
gaagaatacttcaagtactttgtattgaagatttcagcagggattgaataccctggtgag
attaggtggccactggcgctgtctctttttctcgcctgggtgatcgtgtatgcctccctt
gctaaaggaatcaagtcatcaggaaaagtcgtgtacttcacagcaacgttcccttacgtg
gttctcatcatcctacttatccgaggtgtgacactacctggggctggagctgggatctgg
tacttcatcacgcccaagtgggagaagctcattgatgctatggtttggaaggatgctgcc
actcagattttcttctccttatctgcagcgtggggaggtctaattactctctcttcttac
aacaaattccataataactgctacagggacacactgatagtcacgtgtaccaacagtgca
acaagtatatttgccggctttgtcatcttctcagttattggcttcatggcaaacgagctc
aaagtgaatattgaagctgtggcagaccaaggtcctgggattgcttttgttgtttacccg
gaagctttaactaggcttcccctttctccattctgggctatcatattctttttgatgctt
ctgacacttggattggacactatgtttgccactatcgagactatagtgacctctgtttca
gatgaattccccaaatacttacgtacacacaaggcactgttcactcttgggtgctgcatt
tcctttttcatcatgggatttcctatgatcactcagggtggaatgtatatgttacagctt
gtggacacttacgcagcttcttactctcttgtcatcattgccatatttgagcttgttgga
gtttcctacatttatggattgcaaaggttttgtgaagatatagaaatgatgattggattc
cagccaagtaaattctggcgagtctgttgggcctttgtgactccaactatcttaacattc
attctttgcttcagtttttaccaatgggaaccgatgacttatggagcttaccactacccc
ggctggtcgatggtgcttgggtggctgatgctggcctgctcagttatttggatcccagtg
atgtttgtgataaaaatgcatctagccccaggcaaatttattgagcgactcaagctggtg
tgctctccacagccagactggggtccatttttggccaagcaccgtggtgaacgttacatg
aatatgattgatccactgggaacatcttccttgggacttaaactgccagtgaaggacata
gaactggggacccaatgctaa
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