Lagopus muta (rock ptarmigan): 125694643
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Entry
125694643 CDS
T09141
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04517
IgSF CAM signaling
lmut04518
Integrin signaling
lmut04519
Cadherin signaling
lmut04520
Adherens junction
lmut04530
Tight junction
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125694643 (ACTN1)
04518 Integrin signaling
125694643 (ACTN1)
04519 Cadherin signaling
125694643 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125694643 (ACTN1)
04520 Adherens junction
125694643 (ACTN1)
04530 Tight junction
125694643 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125694643 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125694643 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125694643 (ACTN1)
04147 Exosome [BR:
lmut04147
]
125694643 (ACTN1)
Membrane trafficking [BR:
lmut04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125694643 (ACTN1)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125694643 (ACTN1)
Exosome [BR:
lmut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125694643 (ACTN1)
Exosomal proteins of colorectal cancer cells
125694643 (ACTN1)
Exosomal proteins of bladder cancer cells
125694643 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
125694643
NCBI-ProteinID:
XP_048804135
LinkDB
All DBs
Position
6:28054243..28134536
Genome browser
AA seq
893 aa
AA seq
DB search
MDHHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGN
VKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN
RAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQ
KDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKI
CDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQE
INGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIE
MHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLG
YDIGNDAQGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGD
KNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcactacgacccgcagcagaccaacgattacatgcagccggaggaggactgg
gaccgggacctgctcctcgacccggcttgggagaagcaacagcggaagacatttacagca
tggtgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttc
agggatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaag
cctgaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggctttggatttc
attgccagcaaaggagtcaaactagtatcaattggagcagaagaaattgtggatggcaat
gttaaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatc
tcagttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagcc
ccctacaaaaatgtaaacatccaaaacttccatatcagttggaaagatggccttggtttc
tgcgctttaattcatagacatcgtccggagctcattgattacgggaagctgcgaaaggat
gatcctctcactaatctaaacacagcctttgatgtagctgaaaaatatctggatatcccc
aagatgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatg
acctatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagca
aatcgtatttgcaaggtgctggcagtcaaccaagagaatgaacagctcatggaagactat
gaaaaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaac
cgggcaccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactac
cgccgcctgcacaagccccccaaagtccaagagaagtgccaacttgagatcaatttcaac
accttgcagaccaagctacggctcagcaacaggccagccttcatgccttcagaagggaaa
atggtttctgatataaacaatgcctggggtggcctagagcaggctgagaagggctatgag
gagtggttgttgaatgagatccggaggctagagaggttggatcacctggctgagaagttc
cggcagaaggcatctattcacgagtcctggacagatggtaaggaagcgatgctgcagcag
aaggattatgaaactgctaccctctcggagataaaggcactgctgaagaaacacgaggcc
tttgagagcgacctggctgcacaccaagaccgcgtggaacagattgctgctattgcacaa
gagctgaatgagctggactattacgattctccaagtgtcaatgccaggtgccagaagatc
tgtgatcagtgggataatctgggtgccctaacccagaaacgtagagaagctttagagagg
acagagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcc
cccttcaataactggatggaaggggccatggaggacctccaggacacgttcattgttcac
accattgaggagatccagggattgaccacagcccacgaacagttcaaggccactttgcca
gatgctgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtc
caaacgtaccacgtcaacatggcaggaacgaatccttacactacaatcaccccacaggag
atcaatggcaaatgggaacatgtgcggcagctggttcctagaagggatcaagccctaatg
gaagaacatgctcgccagcagcaaaatgagcggcttcgtaagcagtttggtgcacaagcc
aatgtcatcggtccctggattcagaccaagatggaggagattggccgcatttcaatagag
atgcatgggactctggaggaccagctcaaccacttgcggcaatatgagaaaagcattgtg
aattacaaaccaaagatcgaccagttggaaggagaccaccaacagatccaggaggcgctt
atctttgacaacaagcacaccaactacaccatggagcatattcgagtgggctgggagcag
ctattaacaacaattgctagaaccattaatgaagtggaaaatcagattctgacccgtgat
gccaaaggaataagccaggaacagatgaatgagttccgagcctctttcaaccattttgac
agggaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggt
tacgatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtc
gaccctaatcgcatgggtgtagtgacgttccaggccttcatcgacttcatgtctcgggaa
acagcagatacagatactgctgaccaggttatggcttctttcaagatcctggctggagat
aagaactacatcactgtggatgagttacggcgggaactgcctcctgatcaggctgagtac
tgcattgctagaatggcaccctacaatggccgtgatgctgtacccggtgccctggactac
atgtctttctccacggcgctctatggcgaaagtgacctttaa
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