Lagopus muta (rock ptarmigan): 125694651
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Entry
125694651 CDS
T09141
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
lmut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125694651
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125694651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125694651
Spliceosome [BR:
lmut03041
]
Common components
Common spliceosomal components
SR proteins
125694651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125694651
NCBI-ProteinID:
XP_048804160
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All DBs
Position
6:28139406..28155779
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AA seq
302 aa
AA seq
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MPYPQQKASALLAGSSPMAHITLKMSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLK
NGFGFVEFEDHRDADDAIYELNGKELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRY
GPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSA
LEKLDGTELNGRRIKLIEDHRRHRSRSRSRSYSRSRSKSKSTGSSRSYSRSRSRSRSRSR
SRSRSRSRSRSRSRSRSRSRSRTPKKSYSQKSHRSSLPASSPSPSSSKRKSRSRSSSAHS
RS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccttacccccagcagaaggccagtgccctcctcgcaggcagttctccaatggcacac
atcacacttaagatgagtggctgccgtgtcttcgttgggcacttaagctcacgtgctcgg
gagcgggatgtggagaagttcttcaaaggctatggacgcatacgagaaatccatctaaag
aatggatttggatttgtggaatttgaagaccacagagatgctgatgatgcaatttatgaa
ctgaatggaaaagagttgtgtgatgaaagggtcacgattgagcatgctcgagccagaaga
ggaaggggcagattcgcacagcggttcagttattactcgcagagtggatctagccgctat
gggccgcctgttcgtactgaacacaggatcatagtggaaaacctttcgtcccgtatcagc
tggcaggacttgaaagatgtcatgagaaaagcaggggaggtcacctatgtggatgcacac
agaaacaataggaatgaaggggttgtggaatttgcatcttacagcgatatgaagagtgca
ctggaaaaattggatggcactgagctgaatggacgcagaattaaactgattgaggatcac
aggaggcataggagcagatctcgatcgaggagttactcaaggtctcgcagcaagtccaag
tctacaggatcttcgaggtcatacagccggtccaggtccaggtccagatccaggtccaga
tccaggtccaggtcgaggtctcgctctcgatcccggtcccgctcccgctctcgttctcgc
agccgtacgcctaagaagagctactcccagaagagtcaccgctccagcttgccagcttct
tccccatctccctcctcttctaaaagaaaatctcgttctaggtcgagctctgctcacagc
cgtagttaa
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