Lagopus muta (rock ptarmigan): 125694752
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Entry
125694752 CDS
T09141
Symbol
SUPT20H
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125694752 (SUPT20H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125694752 (SUPT20H)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125694752 (SUPT20H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
125694752
NCBI-ProteinID:
XP_048804343
LinkDB
All DBs
Position
1:170500918..170536887
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AA seq
825 aa
AA seq
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MQQALEQALDRAEYIIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEIKQKLRR
NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSGNMKSPTYQSKHILLRPTMQTLICDVHS
ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTTNRLLYNKQKMNTRPMKRCFK
RYSKSSLNRQQEVAHYSTPPQLRLVDYLQKKKEKKGTQQYDLKISKAGNCVDMWKQNPCY
LTAPSEVDVEKYAKVESSIKPDDSQPTVWPAHEVKDDYVFECEVGNQLQKTKLTIFQSLG
NPLYYGKIQTLKGDDESDSLLVPPQFLIGSKTDAERVVNQYHELVKSEAKCPVKMFHNSG
GSINLSHLSPGKEMEQPESISGSVQSSVLGKGVKHRPPPIKLPSSSGSSSSGNIFSPQQS
SGHLKSPTPPPPPPSSKPPGLSRKQSMDLNQVSMLSPAAMSPASSSQRSGTPKPSTPTPT
NTPSSTPHPSDAQSSTPITPSATPTPQESGFTPQPTLLTPFAQQQMSLSQALPVMTIPLS
TMVTSITTGTASTQVMANPAGLNFINVVGSVCGAQTLMSGSNPMLGCNTGAIAPAGINLS
GILPSGGLVPSALPAAMQSASQAGSPFGLKNASNLRPLNLLQGSDQGPSNQDQALSAQQA
AVINLTGVGNFMQPQATVLSQLGSAMNRPGQSLPQQRLQLSSALQQQQQQALQQQQQQIQ
QLRFLQHQMAMAAAAAQAAHLRHQQHSGSHSKSKRKRGTPAPPKS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagctttagaacaggcactggatcgagcagagtacatcattgaaagtgctcgt
caaagacctcccaaaagaaaatatttatccagcggaagaaaatctgtatttcaaaaactc
tatgatttatatatagaagaatgtgaaaaagagcctgagataaagcagaagctgaggcga
aatgtgaatttacttgagaagctggttatgcaggagacgttgtcatgtctggtagtgaac
ctctatccgggaaatgagggttattcacttatgctcaggggaaaaaatggttcagattct
gagaccattcgactgccttatgaggaaggagagctgcttgaatatttggatgcagaggag
ttaccgcctattttggttgatctcttagaaaaatctcaggttaatatttttcactgtgga
tgtgtcatagcagaaatacgtgactataggcagtctggtaacatgaaatctccaacatac
caaagcaagcacattcttttgcgtcctacaatgcagaccttaatttgtgatgttcactct
ataacaagtgacaaccacaaatggacacaggaggacaaactcctacttgagagccaactt
attttggctacagccgagcctttgtgtcttgatccgtcaatagcagtgacctgtactaca
aacagactcctgtacaacaagcagaaaatgaatactcgccccatgaaacggtgtttcaaa
aggtactcaaagtcatctctgaataggcagcaggaagtagctcactactcaactccacct
cagctcagattagttgactacttacagaaaaagaaggagaagaaaggaacccagcagtat
gacctcaaaatttctaaagctggaaactgtgtagatatgtggaaacagaacccttgctat
ttgactgcaccttctgaagtggatgtggaaaaatatgccaaagtggagagttctatcaag
cctgatgactcacaaccaactgtttggccagcacatgaagtaaaagatgattatgtgttt
gaatgtgaagttggtaatcagctgcaaaaaacaaagctgaccatttttcagtctcttggc
aatccgctgtactatggtaaaattcagacactcaaaggtgatgatgagagtgacagctta
ttagttccaccacagttccttattggttccaagactgatgctgaaagagtggtgaaccag
tatcacgagttggtaaaaagtgaagctaaatgtcctgtgaaaatgttccataattcaggt
ggatcaatcaatcttagtcatctttctccagggaaggaaatggaacagcccgaaagtata
tcaggctctgttcagtcttcagtattggggaaaggtgtaaaacaccgacctcctcccatc
aaattaccttcaagttcaggaagtagctcttcaggtaatatctttagtccacagcagtca
agtggccatctaaaatccccaactcctccacctcctccaccttcttctaagccacctggt
ctttctcggaaacaatctatggatcttaaccaagttagcatgctctctccagctgccatg
tctcctgcgagctcttcacaaaggtctggaactcctaaaccatctactcctactccaacc
aacaccccttcatcgaccccacacccttctgatgctcagagctcaactcctattacccct
tctgccacccctactccccaagaatcaggcttcacccctcagcccactttgttaaccccg
tttgctcagcagcagatgtctctgagccaggcactgcctgtaatgaccattcctctttcc
accatggtaacatccattactacaggaacagcctccacccaggtcatggcaaaccctgca
ggacttaacttcatcaatgtagtgggctctgtgtgtggagcacagacattgatgagtggt
tcaaaccctatgttggggtgcaacactggtgccatagcccctgcaggtataaatctgagt
ggcattttaccatcaggaggtctggtaccaagtgcactgcccgctgcaatgcagtctgcc
tctcaagcaggcagcccttttggtttgaaaaatgcatcaaatcttcggcccttaaatctt
ctacaggggtctgaccaaggtccatcaaatcaagatcaggcattgtctgcccagcaagct
gctgtcattaacctgaccggagtagggaatttcatgcaacctcaagccacagtgttgtct
cagcttggctctgccatgaacagacctgggcaaagccttcctcagcagagactccagctc
tcttctgccttacaacagcaacaacaacaagccttgcagcagcagcagcaacagatacaa
cagttgcgattcttgcagcatcaaatggctatggcagcagcagcagcacaagcagctcat
ctacgacatcagcagcattcaggcagccactcaaaaagtaaaaggaaaagaggcacacct
gcccctccaaaatcctga
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