Lagopus muta (rock ptarmigan): 125694816
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Entry
125694816 CDS
T09141
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125694816 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmut03400
]
125694816 (MLH3)
DNA repair and recombination proteins [BR:
lmut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125694816 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125694816
NCBI-ProteinID:
XP_048804509
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Position
6:complement(37972345..37990659)
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AA seq
1403 aa
AA seq
DB search
MIKHLAEDVQARLRSGVAVTSLGQCVEELVFNSIDAKATCVAVRVDLEAFKIQVVDNGSG
MGRDDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIANMASVVEVSSKSSKTAKTF
VKLFHNGHALEVCEAELSRPSGGTTVTVCNLFHQLPVRRRCMDPVLEFERVRQKVEAISL
MHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREIKHKSGGFEISGYIS
TEGHYNKNMQFLYINRRLVLKTRLHKLIDFLLRKESVICKAKSVPVSRQGSSSPGRLRCG
PELYGIFVLNVTCAYSDYDVSLEPAKTLIEFQNWDVLLACVEEGVKMFLKREHLFVEPCC
EDIKEFNEDNNFCLRNAPVTKSTLPEDKSIQENFQKACDEIIDSYEVCKLQSKDVKRKSI
VGRKSSNPTESNTQETEISSNQKIAELSGQCRNKKAEIPLSKKDDTTSNFIISDMLEQEP
KDTISSQKRCDTHLKSSETLHSSLTEGARSEIMKKGSCDDLWRCAENCAKGVGSQQDKVV
QKSNTLCISNNTSTWWPSEREDPTETAGESETVYGSSLIRLPHVREGDRETTEVIDNAGR
GTVSSVPEKVRSHFSLKTCIMQNEPPRERKQTETNLALNMHCRACPVSAKHTSMHKMSLP
IQSLNAKYVSSNVNKEYIPLCSREVGMADGNERSENRSLPSQARDGRDMSIATSKRHYET
SNVSDLPLATSSGIPHSKAVKSTRRQLAEPRSQPCKKLSLSTQLGSLEKFRRYYGRVKCT
LPTPSPEQSEFCLPVSNVQANCDFSRSQNNSHGRLSICETPTLDSNNNSHVLRSLDEVLL
CSGETSLDRRALCRSPLTLSDYSEVSKKTVSSQRSPGSLSSKLRQMKSDHRAVKQLGEQL
QTDSSRKDNHSFDLESSSNDFLYNPCQRYKSSVEEMREGCSISKRDACPQSDDLRAESMK
CTVSLSPLSSTEGEYTISASSVLPFPAEKDGIDIICEDERMLDESSKQNVKDPEVHCMTF
PSNLAFSGDNARTGDPRDDLRNSDWLQDFDALLGKTIYINKATGLSTYNTPPEEFPAACI
KDLTTMTVNVVSENGGEGESLQSMLSEWDNPVFVRCPEIAVDVTSGQAENLAVKIHNILY
PYRFTKDMIHSMQVLQQVDNKFIACVINTRNEMDKKEGGNLLVLVDQHAAHERIRLEQLI
ADSYEKEATACGKKKFLSSSVSPPLEIEVTEEQRRILWCCYQNLKDLGLELSFPETNNSL
ILVKKVPLCFTEREANELRRKRQPVNKSIVEEFIKEQVELVQTTGGARGTMPLTFLKVLA
SQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQCAHGRPSMMPLADIDHLQQETQAKPN
LARLRKMVRAWQLFGNKDPNLKR
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcacttggcagaggacgtgcaagccaggctgcgctctggagtggcggtcacc
tcgctggggcagtgtgttgaggagcttgtcttcaacagcatcgatgccaaagcaacgtgt
gtagctgttagggtggatttggaagcttttaagatccaggtggtggataatggctccggc
atggggagagatgacttaagtaaaatgggaaagcggtacttcactagtaagtgcagctca
gtggcagacttagagaagctgacgttctacggcttcagaggggaggctctggcaagcata
gcaaacatggccagtgttgtggaagtttcatctaagagcagcaagacagcaaaaactttt
gtgaaactgtttcacaatgggcatgcactggaagtctgtgaagctgaattgagcaggcca
agtggcggaacgacagtgaccgtgtgtaatctgttccatcagttaccagtgaggaggagg
tgcatggatcctgtgctggaatttgagagggtgaggcagaaagtagaggctatatcattg
atgcatccctctgtttcactttctttaaggaatgatatttcttgttctatggtgcttcag
ctccctaagacaagagatgtttactctcgtttttgtcaaatatatgggctgggcagatct
cagaagttaagagaaataaagcataagtccgggggatttgagataagtggttacatcagt
actgaaggacattacaataagaatatgcaattcttgtatatcaatagaaggcttgtttta
aagacaagactacataaactgattgactttttattaagaaaagaaagtgtcatttgtaag
gcaaaaagtgtccctgtgagcagacagggttcctcaagtcctggtcgccttcgttgtggc
ccagagttgtacgggatctttgttctcaatgtgacctgtgcgtacagtgactacgatgtg
tctctggaacctgcaaaaactctgattgagttccagaactgggatgttcttctagcttgt
gtagaggaaggagtgaaaatgtttttgaaacgagaacatttatttgttgaaccttgttgt
gaggacatcaaagagtttaatgaggataataatttttgtttgcgtaatgctccagttacg
aaatccacactccctgaggataagagcatccaagaaaactttcagaaagcatgtgatgaa
attatagattcctatgaagtgtgtaaattgcaatcaaaagatgtcaaaagaaaatccata
gtgggaagaaaatcttcaaatcctacagagtcaaatacacaggaaactgaaatttcctca
aatcagaagattgctgaactctctggtcaatgtagaaacaaaaaagcagagattccactg
tccaagaaagatgacaccacttctaatttcattatatctgatatgttggaacaggagcca
aaagacacaatcagttcccaaaaacggtgtgatactcatctgaaatcttcagaaactctc
cattcctctctgactgaaggagccagatcagaaataatgaaaaaaggcagctgtgatgac
ttgtggcgttgtgctgagaattgtgcaaaaggcgtaggaagccagcaagacaaagttgtg
cagaaaagcaatacgctttgtatctcaaataatacttctacgtggtggccatctgagaga
gaagaccctactgaaacagcaggggaatctgaaactgtctatggaagttcattgataaga
ctacctcatgtaagagaaggagacagggaaacaactgaagtaatagataatgctggaaga
gggactgttagttcagtaccagaaaaagtgcgttctcacttcagcctcaaaacgtgtatc
atgcaaaatgagccaccccgtgaacgtaagcaaacagaaacaaatcttgcattaaacatg
cactgtagggcttgtcctgtgagtgccaagcacacttccatgcacaaaatgagtttgccg
attcagtctttaaatgctaagtatgtttccagtaacgtgaataaagaatatatacctctc
tgcagcagagaagttggcatggctgatggaaatgagaggtcagagaataggagtttgcca
agtcaagcacgtgatgggagagacatgtccattgccaccagtaaaagacattatgaaaca
tcaaatgtgtcagacttgccactggcaacatcttcaggtattcctcacagtaaagctgta
aaaagcactagaaggcaattagctgagccaagatcacagccttgcaagaagctgagcctg
tctacgcagctgggttcgttagaaaagttcaggagatattatgggcgtgttaagtgtacg
ctaccaacaccatcaccagagcagagtgaattctgtctcccagtttccaatgtacaagct
aattgtgacttttcaaggagtcagaataacagtcatggtcgcttgagcatttgtgagact
ccaactttggattctaataataacagccatgttttgagatctttggatgaagttttactc
tgcagtggagaaacttcactggacagacgagccctttgtcgcagccctttgacgttgtct
gattactcagaggttagtaaaaaaactgtgagtagtcaaagatctccaggatccctatca
tccaaactgcgccaaatgaaaagtgatcaccgagcagtgaaacagctgggtgaacaactc
caaacagattcaagtagaaaagataaccactcttttgatcttgaatcttcaagtaatgat
tttttgtataacccttgtcaaaggtataaatcttcagtggaagaaatgagggaaggttgc
agcatttctaagagggatgcttgcccacagtcagatgatttgagagcagagtccatgaaa
tgtactgttagcctgtcaccactcagcagtactgaaggagagtacacaatctctgcaagc
agcgttttaccatttccagcagaaaaagatggcattgacatcatctgtgaagatgaaagg
atgttagatgaatcatcaaaacaaaatgtgaaagatcctgaggttcattgcatgactttc
ccaagtaacctggcattctctggggataatgcaagaacaggtgatcccagagatgatttg
cgtaattcagactggctgcaagattttgatgctttattgggtaagacaatctacatcaat
aaagcaacaggactgagcacctacaacactcctcctgaagagtttccagctgcctgcatt
aaagatttaacaacaatgaccgtgaatgttgtctcagagaatggtggtgaaggcgagtct
ctgcagtccatgctttcagaatgggataaccctgtttttgttcgctgcccagagatagct
gttgatgtgaccagcggtcaggctgagaatcttgctgtgaaaattcataatattttgtat
ccttatcgttttaccaaagacatgattcattcaatgcaggttcttcagcaagtggacaat
aaattcattgcttgtgtaatcaacaccaggaatgagatggataaaaaggaaggtggaaac
ctgttggttttggtggaccaacatgcagctcatgaacggatccgcctggagcagcttatt
gcagattcctatgagaaggaagctaccgcatgcggcaaaaagaaatttctgtcttcctct
gtctctccccctttagagattgaagttacagaagaacaaagaagaattctatggtgctgc
taccaaaatttgaaggatctgggccttgaattatcatttcctgagaccaacaactccttg
attctagtgaagaaagtgccactgtgttttacagaaagagaggccaatgaactacgacgg
aaaagacaacctgtcaataaaagcattgtggaggagtttattaaggaacaagttgagcta
gtgcagaccacgggaggagcacgagggacaatgcctctgacatttctgaaggtgttagct
tcccaagcctgtcacggagctattaagtttaatgacagtttgacttcagaagagagctgt
cggctcatggaagctttgtcatcttgccagctgcccttccagtgtgctcatggaagacct
tccatgatgccccttgcagacattgaccatctacagcaggaaacgcaggctaaacctaac
ttggcgagactgcggaaaatggtgcgagcatggcaactgtttggaaacaaagaccctaac
ctaaaaaggtaa
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