Lagopus muta (rock ptarmigan): 125694884 Help Entry 125694884         CDS       T09141                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism lmut  Lagopus muta (rock ptarmigan) Pathway lmut03040   Spliceosome lmut04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lmut00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     125694884 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     125694884 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:lmut03041]     125694884 (PRPF19)    04121 Ubiquitin system [BR:lmut04121]     125694884 (PRPF19)    03400 DNA repair and recombination proteins [BR:lmut03400]     125694884 (PRPF19) Enzymes [BR:lmut01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      125694884 (PRPF19) Spliceosome [BR:lmut03041]  Complex B   Other components    Prp19 complex     125694884 (PRPF19)  Complex C    Prp19-CDC5 complex     125694884 (PRPF19) Ubiquitin system [BR:lmut04121]  Ubiquitin ligases (E3)   U-box type E3    125694884 (PRPF19) DNA repair and recombination proteins [BR:lmut03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     125694884 (PRPF19) SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_EIPR1 CFAP251_N Beta-prop_HPS5 NBCH_WD40 ASA1 U-box Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_DCAF4 PAC11 PEP5_VPS11_N WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_Nup120_160 PROPPIN Beta-prop_SPT8 Beta-prop_ACSF4 Cytochrom_D1 Ge1_WD40 Beta-prop_DCAF12 RMC1_N zf-Nse Beta-prop_WDR35_TULP_N TRM82_WD Alpha_humulene_synt DUF1830 CCDC13 ATG16 GP3 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  125694884 NCBI-ProteinID:  XP_048804666 LinkDB All DBs Position 6:6799500..6803520 Genome browser AA seq 504 aa AA seqDB search MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSSQPNVPGAGESMELGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ VVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG VAFGHHAKFIASTGMDRSLKFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atggctctcatctgctccatctccaacgaggtccccgagcacccgtgcgtgtcgccggtg tccaaccacgtgtacgagcggcggctgatcgagaaatacattgcggagaacggcaccgac cccgtcaacaaccagcccttgtccgaagagcagctcatagacatcaaagttgcccatccc atccggcccaagccaccatcggccaccagcatcccggccatcctgaaggcgctgcaggat gagtgggatgccgtcatgctgcacagcttcacgctgcgccagcagctgcaaaccacgcgc caggagctgtcccacgcgctgtaccagcatgatgctgcctgccgtgtcatcgcacggctt accaaggaggtcactgctgccagagaagctctggccacactgaaaccgcaggccggcctt atcgtgccacaggcagtgccgtcctcacagcctaatgtgccgggagcaggggagtccatg gagctgggtgagcttgcaggcatgacccctgagattatccagaagcttcaagacaaggcc actgtgctgaccacagagcgcaagaagaggggcaaaacagtgccagaggagctggtgaag ccagaggagctcagcaagtaccggcaggttgcctcgcatgtggggctgcacagtgccagc attccaggaatcctggccttggacctctgtccttccgacaccaacaagatcctcactggt ggggctgataaaaatgtcatcgtctttgataagagctcggagcagatcctggcgacactc aagggccactctaagaaggtcaccagtgttgtgttccacccctcacaggatttggtgttc tcagcttctcctgatgccaccatccggatctggtctgtgcccaatgcttcctgtgtgcag gttgtccgtgcccatgagggctctgtgacagggctcagcctgcatgccacgggtgattac cttctgagctcttctgatgaccagtactgggccttctcagacatccagacgggccgtgtt ctcaccaaggtgacagatgagagctctggctgcgccctcacctgtgcccaattccaccca gatgggctcatctttggaacgggaacgatggattctcagatcaaaatctgggatctgaag gaacgcaccaacgtggccaacttcccagggcactcgggccccatcaccagcattgccttc tctgagaacggctactacctggccacagctgcagacgactcctctgtcaagctctgggac ttgcgtaaactgaagaacttcaagacgttgcagctggacaataacttcgaggtgaagtct ctcatctttgaccagagtggcacctacctggcgctgggcggcacagacgtccagatctac atctgcaagcagtggacagaaatcctccacttcactgagcacagtggcctcaccacaggg gtggcttttggccaccatgccaagttcatcgcctcgacaggcatggaccgcagcctgaag ttctacagcctgtag

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