Lagopus muta (rock ptarmigan): 125695191
Help
Entry
125695191 CDS
T09141
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125695191 (SSRP1)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125695191 (SSRP1)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125695191 (SSRP1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125695191 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
125695191
NCBI-ProteinID:
XP_048805305
LinkDB
All DBs
Position
6:16874837..16882972
Genome browser
AA seq
706 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAKKAKIVKDRKPRKKQVESKKGK
DPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
AKRDYEKAMKEYSVGNKSESSKMERSKKKKKKQEKQMKGKMEKKGAASKSSSSTKSSAKN
MSESFKSKEFVSSDESSSAESKKEDSDDERGASPAQSSEDSASGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacactggagttcaacgagatctaccaggaggtgaagggatccatgaatgat
ggccggctgcggctgagtcgccagggcgtcatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcagagttggcagagggtgtgtggcggcgtgtggcactcggtcac
ggcctcaagcttctcaccaagaacggccatgtctacaaatacgatggtttccgggaatcg
gagtttgataagctctcagatttcttcaaggcacactatcgtctggagctggccgagaag
gacctgtgtgtgaagggttggaactggggcacagtgaggttcggagggcagcttctctcc
tttgacatcggggagcagccagtgtttgagatccccctcagcaatgtctcccagtgcacg
acgggcaagaacgaagtgacgctggagttccaccagaatgatgacgctgaggtctcactc
atggaggttcgcttctacgtgccccctacccaggaggatggtgttgaccctgtggaggcc
tttgctcagaatgtcctctccaaggcggatgtgatccaggcaactggtgatgccatctgc
atcttccgggagctgcagtgtttgacgcctcgtgggcgatacgacatccgcatctacccc
accttcctgcacctccatggcaaaacctttgactacaaaatcccctatactaccgtgctg
cgcctcttcctgctcccacacaaggaccaacggcagatgttctttgtgattagcctggat
ccaccgataaagcagggccagacccgctaccacttccttatcctgcttttctccaaggat
gaagacatctcactgaccctcaacatgaatgaggaagaggtggagaaacgcttcgagggg
cggctcactaagaacatgtcaggctccctctatgagatggtcagccgagttatgaaggca
ctggtgaaccgcaagatcactgtgcctggcaacttccagggacactctggagcccagtgc
atcacctgctcctacaaggccagctcaggacttctctacccactggagcgtggtttcatc
tatgttcacaagccgccagtgcacatccgctttgatgagatctcctttgtcaactttgcc
cgtgggaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacacag
tacaccttcagcagtatagagagggaggagtacgggaagctctttgattttgtcaatgcc
aagaagctgaacatcaagaaccgaggcctcaaggagggtatgaagcagagctacgatgaa
tatgccgactctgatgaggaccagcacgacgcctacctggagaggatgaaggaggagggc
aagatccgggaggagaacgccaatgatagcagcgatgggtctggagaggagacagatgag
tcattcaaccccggggaagaggatgatgatgtggctgaagagtttgacagcaatgcctcg
gccagctcctccagtggggatggtgacagtgaccgaggtgagaagaagccagccaagaag
gccaagatagtcaaagaccgcaagccccgcaagaagcaggtggagagcaagaaaggcaaa
gaccccaatgctcccaagagacccatgtcggcttacatgctttggctgaatgccaaccga
gagaagatcaagtcagaccatcctggtatcagcatcacagacctgtccaagaaggctggg
gagctctggaaagccatgtctaaggagaagaaagaggaatgggatcgcaaggcagaagat
gccaagagggattatgagaaggccatgaaagagtacagcgtgggcaacaagtcagagagc
tccaagatggagaggtctaaaaagaagaagaagaagcaggagaaacagatgaaagggaaa
atggagaagaagggtgctgcctccaagtcttcgtcctccaccaagtcctctgccaagaat
atgagcgagagcttcaagagcaaggaatttgtctccagcgatgagagctcctctgcagag
agcaagaaggaggactcagacgatgagagaggcgccagcccggcccaaagctcagaggat
tctgcgtctggctcggattag
DBGET
integrated database retrieval system
