Lagopus muta (rock ptarmigan): 125695224
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Entry
125695224 CDS
T09141
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04136
Autophagy - other
lmut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125695224 (ATG13)
04136 Autophagy - other
125695224 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125695224 (ATG13)
03029 Mitochondrial biogenesis [BR:
lmut03029
]
125695224 (ATG13)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125695224 (ATG13)
Atg1 complex
125695224 (ATG13)
Mitochondrial biogenesis [BR:
lmut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125695224 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125695224
NCBI-ProteinID:
XP_048805360
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All DBs
Position
6:complement(23331190..23353039)
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AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLICPGKEGGVPPVPSQPAHGTQADQERT
CTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSAGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcgcaggacaggaaggacctggacaagttcatcaaatttttt
gctctgaagacggtacaagtaattgtccaggcccgactcggagagaaaatctgtacccga
tcgtcatcctccccaacaggctccgactggttcaatttggccatcaaagatataccagag
gttactcatgaagcaaagaaagccttggcaggacagctgcctgctgttggacggtctatg
tgcgtggagatttctcttaaaacctcagagggggattccatggagctagaaatttggtgt
ctagaaatgaatgagaagtgtgataaagaaatcaaagtctcatacacagtatacaataga
ctgtctctactactgaagtctttgcttgctataaccagggtaactccagcctacagactc
tcaaggaagcaaggccatgaatatgtgatattgtacaggatatattttggtgaagtgcaa
ctgagcggcctgggagaaggttttcaaacagttcgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgcccctat
cccagctcttcgcccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtactacatcattctccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatggggctggccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgcgctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgatctgtccaggcaaagagggg
ggagttcccccagttcctagccagccagcacatggcactcaagctgaccaagagaggaca
tgcaccccactagatggagtgcactactcagcagctactccttctagtagcgaggacaca
gaaacagtatcaaacagcagtgaagggaagtgtggctccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacctattaaccaggtgaccatggcc
aacttagacattccttttgctatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgattccccagaaactgaatctcctctacaaggcagcttacac
tcagagggctccagtggcagcagcgcagggaacacccatgatgactttgttatgattgat
tttaaaccagcattttcaaaagatgacattcttccaatggacctggggacattttaccgt
gagtttcagaacccccctcaactcagcagcctctccattgacataggagctcagtccatg
gcagaggatttggactcactaccagagaagctggcagtccatgagaaaaatgtcaaagag
tttgatgcctttgtagaaaccttgcagtga
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