Lagopus muta (rock ptarmigan): 125695436
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Entry
125695436 CDS
T09141
Symbol
CAPRIN1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125695436 (CAPRIN1)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125695436 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
DUF1140
Motif
Other DBs
NCBI-GeneID:
125695436
NCBI-ProteinID:
XP_048805804
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All DBs
Position
6:18307238..18339686
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AA seq
703 aa
AA seq
DB search
MPSATNSTMASSGSGKAGPGGNEQAPAAAASAPQASGGSITSVQTEAMKQILGVIDKKLR
NLEKKKSKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKT
IKKTARREQLMREEAEQKRLKTVLELQFILDKLGDDEVRTDLKQGSNGVPVLTEEELTML
DEFYKLVYPERDMNMRLNEQYEQASVHLWDLLEGKEKPVCGTTYKALKEVVERILQTNYF
DSTHNHQNGLCEEEEAAPTPAVEDTVAEGEPDPAEEFTEPTEVESTEYVNRQFMAETQFS
SSEKEQVDEWTVETVEVVNSLQQQTQATSPPVPEPHTLTTVAQADPLVRRQRVQDLMAQM
QGPYNFMQDSMLEFENQTLDPAIVSAQPMNPAQNLDMPQMVCPPVHTESRLAQPNQVPVQ
PEATQVPLVSSTSEGYTASQPMYQPSHSTEQRPQKESIDQIQASMSLNADQTPSSSSLPA
ASQPQVFQAGSSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYN
QSFSNQPHQVEQSDLQQEQLQTVVGTYHGSPDQTHQVAGNHQQPPQQNTGFPRNSQPYYN
SRGVSRGGSRGTRGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQPQFNAPRDYSNYQ
RDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQVN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggctaccaacagcaccatggcgagcagcggcagcgggaaggcgggccccggc
ggcaacgagcaggccccggcggcggcggcgtcggccccgcaggcgtcgggcggcagcatc
acctcggttcagaccgaggccatgaagcagatcttgggagtgatcgacaaaaagctccgc
aacctcgagaagaaaaagagcaaacttgatgactaccaggaacgaatgaacaagggagaa
cgtctaaatcaagatcaactggatgcagtgtcaaaataccaggaagtgacaaataatctg
gaatttgctaaagaactgcagaggagctttatggcactgagccaagatatccagaaaaca
ataaagaagacagctcgcagggagcagctgatgcgagaagaggctgagcagaagcgttta
aagaccgtgctggagctgcagtttattctggacaagctgggtgacgatgaagtgcgcact
gacttgaaacaaggatcaaatggagtgccagtactgacagaggaggaactgacaatgctg
gatgaattctacaagctagtttaccctgaaagagacatgaacatgaggttgaatgagcag
tatgagcaagcatctgttcacctgtgggacttactggaagggaaggaaaaacctgtttgt
ggaacaacctataaagccctaaaagaggttgttgaacgtatccttcaaactaactacttt
gatagcacccataaccatcagaacggattatgtgaggaagaagaggcagcacccacacct
gcagtagaagatactgtagcagaaggtgaacctgatccagcagaagaattcactgaacct
actgaagttgaatcgactgagtatgtaaacagacaattcatggcagagactcagttcagc
agtagtgagaaggaacaggtagatgagtggacagttgaaacggttgaggttgtaaattca
ctgcagcaacaaacacaagctacatctcctccagttcctgaacctcatacactcactact
gtggctcaggcagatcctcttgttagaagacagagagtacaggacctcatggcccagatg
cagggtccatataacttcatgcaggactccatgctggagtttgagaaccagacactcgat
cctgccattgtatctgcacagcccatgaatccagcacagaatttggacatgccgcagatg
gtctgccctccagttcatactgagtcaagacttgcccagcctaatcaagttcctgtgcaa
ccagaagctacgcaggttcccttggtttcttctacaagtgagggatatacagcctcccaa
cccatgtatcagccttctcatagcacagagcagcggccacagaaggaatcaattgaccag
attcaggcttcaatgtcactgaatgcagaccagaccccgtcatcatcgtcgcttcccgct
gcgtcccagccccaagttttccaggctggatctagcaaacctttgcatagcagtggaatc
aatgttaatgcagctccattccaatccatgcaaacagtattcaacatgaatgcacccgtt
cctcctgttaatgagccagaaacccttaagcaacaaaatcagtaccaggccagttacaac
cagagcttctccaatcagccacaccaagtagaacaatcagatcttcagcaagaacagctc
cagacagtggttggtacttaccatggttctccggaccagacccatcaagtggcaggaaac
catcagcaacctccccaacagaatactggatttccacgtaacagtcagccttactacaac
agtcggggagtgtctcgtggtggatcacgtgggactcgcggcttgatgaatggttacagg
ggacctgcaaatggatttagaggaggatatgatggctaccgtccctcattttccaacact
ccgaacagtggttacacgcagccccagtttaatgctcctcgagattattcaaactaccag
cgggatggatatcagcagaacttcaaacgtggttctggacaaagtgggcctcggggagct
cctcgaggtcgtggaggacccccaagaccaaacagagggatgcctcaaatgaacgctcag
caagtgaattaa
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