Lagopus muta (rock ptarmigan): 125695494
Help
Entry
125695494 CDS
T09141
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125695494 (RTF1)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125695494 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
125695494
NCBI-ProteinID:
XP_048805945
LinkDB
All DBs
Position
6:24431231..24459814
Genome browser
AA seq
707 aa
AA seq
DB search
MRGALCVPVGRAARGRPGRSERRAAAGGEGRGEAASAMVKKRKGRVLIDSDTEDSGSEEN
LDQELLSLAKRKRSDSEEKEPPASKPTASSDSETSDSDDEWTVGGSKNKKKGKAGKAEKK
GAMKKQMNKAASSGSSDKDSSAESSAPEEGEVSDSESNSSSSSSDSDSSSEDEEFHDGYG
EDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQ
EEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKK
QPLKTSEVYSDDEEEEEDDKSSEKSDRSSRSSSSDEEEEKEEIPPKSQPVSLPEELNRVR
LSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGTRTN
KGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKEVSIKEAL
NYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELE
ERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHSMKNQQMDPFTRRQCKPTI
VSNSRDPAVQAAILAQLNAKYGSGVLPDAPKDMSKGQGKDKDVNSKSASDLSEDLFKVHD
FDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtgccctttgtgtcccggtcgggcgggcggcgcggggcaggccgggccgctcg
gagcgccgcgccgccgccggcggagagggacgcggggaagccgcctccgccatggtgaag
aagcggaaaggccgcgtcctcatcgactccgacaccgaggatagcggcagcgaggagaac
ctggaccaggagctcttgtcattggccaaacggaaacgaagtgactctgaggaaaaggag
ccaccagcgagcaaacctacagcatcttcggactctgagacatcggacagcgatgatgag
tggaccgttggaggttctaaaaacaaaaaaaagggaaaggcgggtaaggcagagaagaaa
ggagccatgaagaaacagatgaacaaagctgcctcttcaggcagctcagataaagacagc
tcagctgagagctcagcacctgaagagggagaagtgtctgactcggaaagcaacagctcc
tcatctagctcagattcagattcttcatctgaagatgaggaattccatgatggctatgga
gaagaccttatgggagatgaagaagaccgggctcgactggaacaaatgacagaaaaggag
agagaacaggagctgtttaatcggatagagaagagagaagtgctaaagagaagatttgaa
atcaagaaaaaactgaagacggcaaaaaagaaagaaaagaaagagaaaaagaaaaagcaa
gaggaagagcaggagaagaaaaaactcacacagatccaagaatcccaggtcacgtcacat
aacaaagagcgacgatcaaagcgggatgagaaattagacaagaaatctcaggcaatggag
gaactaaaagcagaaagagagaaaaggaagaacagaacagctgaattgcttgcaaaaaaa
cagccattaaagactagtgaagtatactctgacgatgaagaggaggaagaggatgataag
tctagtgagaaaagtgatcgctcatccagatcctcatcctcagatgaagaagaagagaaa
gaggaaattcctcctaaatctcagccagtgtctttgcctgaagaactgaaccgagtacgg
ttatcgcggcacaagctggaacgctggtgtcatatgcctttctttgccaagacagtcact
ggttgctttgtccgtattggcattggaaatcataacagcaaacctgtttatcgggttgct
gaaataactggtgtggtagagactgcaaaggtttaccaactcggtggtacccggacaaac
aaaggactgcagttgcggcatggcagtgatcagcgtgtgtttcgtttggagtttgtctca
aatcaggaattcactgaaagtgagtttatgaagtggaaggaagcgatgttttctgctggg
atgcagttacccacattagatgagataaacaagaaggaagtgtccatcaaagaagctctc
aactacaagtttaacgatcaggatattgaggagatcgtgaaagagaaggaaaggttcaga
aaagcccctccaaattatgctatgaagaaaactcagctgttaaaggagaaggccatggcg
gaggacttgggggaccaagataaggccaaacagattcaagatcagcttaatgaacttgag
gagagagcagaggccctggatcgtcaacgaacaaaaaacatttctgccatcagttacatc
aaccaacgaaatagagagtggaatattgttgagtctgagaaggctcttgtggctgaaagt
cacagcatgaaaaaccagcaaatggacccctttactaggcggcagtgcaagcccacaata
gtgtctaattcccgagatcctgctgtccaggctgctatccttgcccagctaaatgcaaaa
tatggatctggtgtattaccagatgctccaaaggacatgagtaagggtcaagggaaggat
aaagatgtgaactctaaatcagccagtgacctctcagaagatcttttcaaagtccatgac
ttcgatgtaaagattgatcttcaggttcccagttctgaatcaaaggcactggctatcacc
tccaaggctccaccagcaaaagatggtgctcctcggagatcattgaatttggaggactac
aaaaagaggcgggggcttatttga
DBGET
integrated database retrieval system
