Lagopus muta (rock ptarmigan): 125695554
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Entry
125695554 CDS
T09141
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
lmut05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125695554 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125695554 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125695554 (NUP98)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125695554 (NUP98)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125695554 (NUP98)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125695554 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125695554
NCBI-ProteinID:
XP_048806180
LinkDB
All DBs
Position
1:complement(194061708..194100707)
Genome browser
AA seq
1814 aa
AA seq
DB search
MFNKSFGTPFGGNTGFGTTSTFGQNAGFGTTGGGAFGTSAFGANSNTGGLFGNTQAKPGG
LFSSNAFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGNPSGSLFGPTSFTAAPTGTTIKFNPPTGTDSMVKSGVST
TINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGAGATTGLFGTSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTTTTGFGTGTTGGLFGQQTQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTSTMGIFGATQPSQPGGLFGTAATTNAGTAFGTGTGLFGQANTGFGV
GGSTLFGSKPAGFGTTTTSTSFGTTTGGGLFGNKPTLSLGTNTNTSNFGFGANNAGNSLF
GNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFG
APQPAVALTDPNASAAQQAVLQQHLNNLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKL
VLKNLSGSSLFSPVNRENDDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEEEHHEVT
RFYTNPIAKPIPQSPENTAHKHQNSVDDTIVALNPRAALRNGLEGSSEDPSFHDDSLQDE
REDEAETVPHVHPAGIVLTRAGYYTIPSMEELAKFTNDKNECIVTDFTIGRKGYGSIFFE
GEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRGLIK
SPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLK
VDAKKLKTTPVPPPGHLPPQQIALNGKPAPPAQSPEVEQVGRVLELDSDMADVTQEPPQE
PAVQDSMAEELEAVPASAHIASTLGINPHVLQIMKASLLADEDDLDLILDHHSGKQPTKM
DTSQEICSPRLPISKSQGQKRCSVAGLLQSKFADTIFQPPSTALYDLQEPRVSRSSPSPA
CWSASSPLASAFAVPPSVPEVQMRTVGVRRQQGLVPLESSITYGKGKLLMDTALFMGRAF
RVGWGPNWTLVNCGDQLSGSRGTEDLPCEAADYGFLPAPVAPKILPESPFKVHVEKLNLE
QRKMNRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRTASEDPAVME
TVVKHWCLTWTLCEAIWGNLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIDEEVA
LTQHRNRVEAVFSCLTGRRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTMQLVDWH
RLQADCFIPEERLRIFALLAGKPVWQLSERTSINVCSQLDWKRCMAVHLWYLLPPTASIS
QALAMYEAAFQTTSESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDRH
YDLDQLLDPRSITCDPMDYRLSWHLWEVLRALNYSHLCRQGQGVLNASYAAQLESEGLWE
WAVFVVLHEPDTHLREKAVRELLGRHCALCDSPESWAKETFLTQRLCVPAEWIHEAKAVR
ARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSALI
QDWELAGLVYLDYIRVIEMVDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHNARDRLA
QSDMAKRIANLLRVVLSLQHSPEPLADGSPELHLVPLRLLAPHVGRLPMPEDYALEELRG
LTQSYLRELTVVTH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatccttcgggactccttttggaggtaacactggctttggaacaacatca
acttttggacaaaatgctggctttggtaccacaggtggaggagcgtttggcacgtcagcc
tttggggcaaacagcaacactgggggcctctttgggaacacccaggcaaagccaggaggg
ctcttcagttccaacgcctttaatcagcccgccacctcctccaccagcactggctttggc
tttggaacatccacagggacatccagcagcctgtttggtaccaccagcactggtgggggc
ctcttctcatcccagagcaatgccttcgcacagaacaagcctgctggctttggaaacttt
ggcacaagtaccagcagcggaggtctctttggaaccaccaacaccacttccaatcctttt
gggaatccatctggctctctgtttggcccaaccagttttactgctgctccgactggcaca
accattaaattcaatcccccaactggtacggatagcatggtcaagtctggagttagcacc
actatcaatactaagcaccaatgcatcactgctatgaaggagtatgagagcaaatctctc
gaggagctgcgtttagaagactacatggccaataggaaggggccctcgaatcctgtgggg
gcaggagccactacaggcttgtttgggacttccactgctacttcaagcacagctacggga
ctttttggctcttctaccactaatacaggcttctcctatggacagaataaaactgctttt
ggaactactacgactggctttggaacaggaacaacaggagggctttttggtcagcagact
caaacgacaagtctgtttaacaaaccatttggtcaggccacgacgacgcagaacacaggc
tttccctttgggaataccagcactctaggacagccaaacacgagcacgatgggaatcttt
ggggccacgcagccctcgcagcccggaggcctttttggaacagctgccactaccaatgct
ggcactgcgtttgggaccggaaccgggctttttggacaggcaaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaaacctgctggatttggaaccaccacgaccagtacc
tcatttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgagtttagga
accaatacaaacacttccaattttggttttggtgccaacaatgctggaaatagcttgttt
ggaaataagcctgcaacggggaccctgggaactgggcttgggacagggtttggaacagcc
ctcggggcaggacagacttcattatttgggaacacccagcctaaactcggtgggacgctg
ggaacaggagcttttggagcaccagggttcaatacctccactgctactctgggctttgga
gcccctcagcctgctgtagcgctgacagatcctaatgcatcggctgcccagcaggcagtc
ctgcagcagcacctcaataatttgacttattcaccctttggagattctccacttttcaga
aaccccatgtcagacccaaagaagaaagaggagcggctgaaaccgaccaaccctgcagct
cagaaggccttaacaacccccacccactacaaactgaccccgcgtccggcaaccagagtg
cgcccaaaggccctgcagtctgcaggctctgccaagtctcagctctttgatggcctcgat
gatgatgagccatccctgtccaatggggccttcatgccaaagaagagcatcaagaagttg
gttttgaagaacctcagtggcagcagcctgttctctcctgtcaatcgtgagaacgatgac
ctggcatctccatcagagtacccagagaatggagacaggttctttttgtcggttcctcct
gatgaaaaccacaggcaagatggcgagcgtgaggaggaggaggagcaccacgaggtgacg
agattttacaccaaccccattgccaagcccatcccacagagccctgagaacacagcacac
aaacaccagaacagcgtggatgacaccatcgtggccctcaatccgcgggcagccctgcgc
aacggcctggagggcagcagtgaggatccctcgttccacgacgattcccttcaggatgag
cgtgaagacgaggctgagacggtgccccacgtgcatcctgcaggaatcgttctaaccaga
gctggctattacaccatcccatctatggaggagctggccaagttcaccaatgacaaaaat
gaatgtattgtgactgacttcaccataggccgtaaaggttatggatcgattttctttgaa
ggagaagtgaatctgaccaacctgaatctggatgacattgtgcatatccgtaggaaagag
gttattgtctacccagatgatgaaagaaagccacctattggtgaaggcctcaacagacga
gctgaagttacactggatggagtctggcctacggataaaacttctcgtggcttgataaaa
agcccagaacggctggcagagatgaattatgagggcaggctggagtctgtgtctcggaag
cagggcgctcgcttcaaggagtaccgccctgagactggatcctgggtgttcaaggtggca
cacttctccaaatacggcctgcaagattcagacgaggaagaggaagagcatcctttaaaa
gtggatgcaaagaagttaaaaaccaccccagtgcctcctcctgggcatctgccacctcag
caaatcgccttaaacggcaagccagcgcctccagctcagagccccgaggtggagcaggtg
ggcagagtgctggagctggacagtgacatggcagacgtcacccaggagcctccccaggag
cctgcagtgcaggacagcatggcagaggagctggaggcagtgcctgcttctgctcacatc
gcgtcgacgctgggcatcaacccccatgtcttgcagattatgaaagcttccttgcttgct
gatgaagacgacctggatttaatcctggaccatcactctgggaagcaacctacaaaaatg
gatacttctcaggagatctgttctccaaggctccctatctcaaaatcccaagggcagaag
agatgctcagtcgctgggctgctgcaatcaaagtttgctgataccattttccaaccaccc
agcactgctctttatgacctccaggagccaagggtgtctcgcagctccccttcccctgcc
tgctggtcagcatcctctccattagcatcagcctttgccgtccctccgtcggtccccgag
gtgcagatgaggacagtgggtgtccgcaggcagcagggcttggtccctctggagagctcc
atcacctatgggaaggggaagctgctgatggacacggcgctgttcatgggacgcgccttc
cgtgtgggctgggggcccaactggactctggtcaactgtggggatcagctgagtgggtcg
agggggacggaggacctcccatgtgaggctgcagactatggattcctgcctgctcctgtt
gctccaaagatactcccagagtcccctttcaaggttcacgtggagaagctgaacttggaa
caaaggaagatgaacagagacaagcagttgtatctcatccctctggagataaagctgaag
cacagcactgtccatatggacgaacagtgtcctctcctggctcccaacccaggagtgtct
gctattcatgactatgctgactgggtccgaacagcatctgaggatcctgctgtgatggag
actgttgtgaagcactggtgcttgacgtggactttgtgtgaagccatctgggggaacctg
aaggagctggaggccagcctggaggagcccagtgagtacgtgctggccctggagcgcagg
agggctttctctcgctggctgtcagagactgcagcagcacggattgatgaggaggttgct
ttgacccaacaccgcaaccgtgtggaggctgtgttcagctgcctcacagggaggaggatt
ggagaggcctgcaggcttgcgcagcaggcaggcaaccaccggcttgccctgctcctctcc
cagctggtgggcagccagcccacacgggacctgctcaccatgcagctggtggactggcac
aggctgcaggcagactgcttcatcccagaggagcgcctgcgcatcttcgctctgctggct
gggaagcctgtgtggcagttgtctgagagaaccagcatcaatgtgtgctcacagctggac
tggaagcgctgcatggccgtccacctctggtacctcctgcctccaacagcttccatctcc
caggcacttgccatgtacgaggcagcatttcagaccacatcagagtctgagaaatacgcc
tgctgccccctgcctccttacctggaaggctctggttgtgtgattgaggaagatgataat
gcaggaagacctctcagagatgtctgtttccatttgttaaagctctacagcgacaggcac
tacgatctggaccagctgctggatcccaggagcatcacgtgtgaccccatggactatcgc
ctcagctggcacctgtgggaggtgctgcgtgccctcaattacagccacctatgcaggcag
gggcagggagtgctgaatgccagctatgctgcccagctggagagcgaaggcctgtgggag
tgggctgtgtttgtggtgctgcacgagcctgatacccacctgcgtgagaaggccgtgcgg
gagctgctgggccggcactgcgctctgtgcgacagccctgagtcgtgggccaaggaaacc
ttcctgacacagcgcctctgcgtccctgccgagtggatccacgaagcaaaggctgttcga
gcccggatggagggcgacaagcataaagaagccctgttcctgttcaaggccgggcactgg
aaccagtgccacaagttggttgtgcggcacctcgcatcagatgccattattaacgagaac
tacaaatacctgaaaggcttcctggaagatctctcccctccggagcgcagcgcactcatc
caggactgggagctggcagggctggtctacctggattacatccgtgtcatagagatggtg
gataggattcagcagctggattgttccacatatgagctggagcgcttgcacaccaaagtg
acgtcgctgtgcaacaggatcgagcagatccagtgccacaacgccagggaccgcctggct
cagtcagacatggccaagcgcatcgccaacctgctgcgcgtggttctcagcctgcagcac
agcccggagccgctggctgacggcagccctgagctgcacctcgtgcccctccgcctgctg
gccccccacgtgggccgcctgcccatgcctgaggattacgccctggaggagctgcggggc
ctcacgcagtcctacctgcgggagctgacggtggtcacgcactga
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integrated database retrieval system
