Lagopus muta (rock ptarmigan): 125695749
Help
Entry
125695749 CDS
T09141
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125695749 (TRIM71)
04121 Ubiquitin system [BR:
lmut04121
]
125695749 (TRIM71)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125695749 (TRIM71)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125695749 (TRIM71)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125695749 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
zf-RING_UBOX
CRLF3_N
DUF4094
Motif
Other DBs
NCBI-GeneID:
125695749
NCBI-ProteinID:
XP_048806590
LinkDB
All DBs
Position
7:complement(39866921..39917437)
Genome browser
AA seq
877 aa
AA seq
DB search
MASFPEADFQVCPLCKEMCGSPAPLSSNSSTSSSSSQTSGSSGGGGSSCGGAARRLHVLP
CLHAFCRQCLEAQRHPAAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVVV
AAAADEQKNGRAAGSGPAAGSGAGGGGANNRHHGRPPPHRAAAAASSPAAGSAAPSSASS
SSSSGGGGPAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLT
KDHFIERFAAGPAAASAGPTAPLALSPPYPASPYNILSVFPERASYCQHHDDEVLHFYCD
TCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAE
QVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKL
DNTISAVQQVLEEGRTIDILLARDRMLAQVQELKNVRGLLQTQEDDRIMFTPPDQALYMA
IKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGP
DGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGL
PGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPG
QFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAE
GKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRL
LVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKF
GTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttcccggaggccgacttccaggtgtgcccgctgtgcaaggagatgtgcggc
tcgcccgctccgctctcctccaactcgtccacctcgtcgtcctcctcgcagacctcgggc
tcctcggggggcggcggctcgtcgtgcgggggcgcggcgcggcggctgcacgtcctgccc
tgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccgccgcgggggac
gcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcgggc
atggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtggtggtg
gcggccgccgccgacgagcagaagaacggccgcgccgccggctccgggcccgccgccggc
tccggcgcggggggcggcggcgccaacaaccgccaccacggccgcccgccgccgcaccgc
gccgccgccgccgcctcctcgcccgccgccggctccgccgcgccctcctccgcctcctcg
tcctcctcctcgggtggcggcggcccggcggcgctgctgctgaggcggccgcacagccgg
cagggcgagccgcgctgcagctcctgcgacgagggcaacgccgccagctcgcgctgcctg
gactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgcgtccgcctcacc
aaggaccacttcatcgagcgcttcgccgccggccccgccgccgcctccgccggccccacc
gctccgctcgccctcagtccgccctaccccgcctcgccctacaacatcctctccgtcttc
cccgagcgggccagctactgccagcaccacgacgacgaggtactgcatttctactgtgat
acctgctctgtccccatatgtcgtgaatgtaccatggggcgacatgtgggtcacagcttt
atctacctccaagatgccctccaggactccaggactcttaccatccagctcctggcagat
gctcagcaaggacgacaggctattcagttgagtattgaacaggcccaggctgtggcagag
caagttgagatgaaagcgaaggtggtacagtctgaagtcaaagcagtgactactagacat
aagaaggccttggaagagcgagagtgcgagctgctctggaaggtggaaaagattcgtcaa
gtcaaggctaagtcgctctatttgcaagttgaaaagttacgtcagaacctaaataagctg
gataacacaattagtgctgttcagcaggtcctggaggaaggtcgtaccatagatattctt
ctggcccgggaccgcatgctggctcaggtgcaggagctcaagaatgtgagaggccttctg
cagacccaggaggatgacaggatcatgttcacaccccctgaccaggcattgtatatggcc
attaaatcaatgggctttgttagtagcggggcttttgctcctctgaccaaagccactggg
gaaggcctcaagcgtgcgctgcagggcaaggtggcctctttcacagttataggctacgac
cacgatggtgagcctcgcctttcaggaggtgacatgatctctgcagtggtaatgggccca
gatggaaatctgtttggggcagatgtcagtgatcagcagaacggaacctacctggtcagc
taccgtccgcaactagagggagagcatctggtgtccgtgatgatgtgcaaccaacacatt
gagaacagccccttcaaagttgtggtgaaatctgggcgcagctacattggcatcgggcta
cccgggctctcgtttggcagcgaaggagacagcgatgggaagctctgccgcccctggggg
gttagtgtagataaagaaggctacatcatcgtggctgaccgcagcaataaccgtatccag
gtgttcaagccatgtgggactttccatcacaagtttggcactctgggttcccggcccggc
cagttcgatcgtcccgccggagtggcctgtgacgtctcacgccggatcgtcgtggctgac
aaggacaatcatcgcatccagattttcacgtttgaagggcagttcattctgaagtttggg
gagaaaggaacaaagaatgggcaattcaattacccgtgggacgtggccgtcaacgcagag
ggcaaaatcctggtctccgacacgaggaaccatcgcgttcagttgttcgggcccgatggt
gtgtttctgaataagtatggctttgaaggggcactctggaagcactttgattcccccaga
ggtgtgactttcaatcacgagggccacttggtagtgacagacttcaacaaccatcgcctt
ctggtcatccacgcagattgccagtcagcgcgcttcctgggctcggaggggagtgggaac
gggcagttcctgcgtccgcagggagtggcggtggatcaagaggggcgcatcatcgtggcc
gactccaggaaccaccgggtgcagatatttgagtccaatggtagctttttatgcaagttt
ggcactcagggaagcggctttggtcagatggaccgtccttcaggtatagctgtcacccct
gatggcatgattgttgtggtcgactttggaaacaatcgaattctcgtcttctga
DBGET
integrated database retrieval system
