Lagopus muta (rock ptarmigan): 125695767
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Entry
125695767 CDS
T09141
Symbol
DYNC2I1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125695767 (DYNC2I1)
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
Dynein and associated proteins
125695767 (DYNC2I1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
125695767
NCBI-ProteinID:
XP_048806629
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All DBs
Position
7:9727460..9754592
Genome browser
AA seq
1027 aa
AA seq
DB search
MEGDKRRTREDTWKSEELRKHLWASQLESQNEDRKHREKKLQKEKVGHDVGTHKDERKER
GKSKERTRERLRSVKRDRDKMRERGKEHRRDQDRERHQDKLKESSLEKERYSVPKDKDRE
SNRERDKMHKRHEIKQPDMHNDLKSFEGRDKGHHRRREKSRHRLEEEKTRGEERERRHTG
KKDNNTKTSIDAFLADRCGGGEHGHKLQKDEELNKEEKKRYREKIEHSIRPGKDRLSKER
SHKSYKKEEEERHKSKRSVEEHPHGHRGRPAEDRKRVKSGENERKKLDLRKSEHKTEEEN
QGEEMSHEHISRTGKDKGKISEKEKRDASQEEVKGTHICHSDPELGNFSADYEDDFEDYE
DDFDDYDEDKSEEGDTEDKLREIHFSKPSEIEEIQRAINAENDRICTSLPLKTRNEKQEP
VMETQYSPARNSFRGIFMDFETAHQRQSSQSMASKQKKRSAELLPLIDLDFSVSFSLLDL
PPVNEYDMYIRNYGKMNTKQAYVQCNEDNLDRDIQTEEVETLEKWTQHPGESALVSGGPI
NGQEMSANGAQSPKIDSLRLANFLRSAAQVIAVLLEEDQAAAQPRWKQRSQQTSLSISDS
CFQLNTNQPFLHDRKISCLYVSQVQRQALLSVHGLPEKAGVALLNRKSIICVWNIWQPSS
PQKVLICDSEVLCCCFSPSKTTLVFAGTVDGSLLVWDLREDTRMHPHITFSETDWTFRVP
TFSTDGILNSVNHTSPILAVEPVSTLYAEQNYGLASLFHQEEMSGPPFQIASMDENGILN
TWVVVELQKVDLAGSQTDLGLIPGGKVKLVHSSAMELNKSLFPKDVCLRMPQTLTVKFLP
SDPNHFIVGTNVGLVGRGTRHDVKVLPKLFRPQESGIRSISINAIDFFPYGKPLFLVGCS
DGSIRLHQMTSEYPLMQWNDSTNGQPVIALQWALTRPAVFFVLDASSNIYIWDLLESDLF
PVAKQTIPSENVITMALLGEPEKTNGLLGIVLANNSGEIDIHYIKKKWALPQPEESEKLN
LILLRSC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgataagagaagaaccagagaagatacttggaaatcagaagaacttaggaaa
catctttgggcatcgcagttagagagtcaaaatgaagacagaaagcacagagaaaagaaa
ctgcagaaagagaaggttggtcatgatgtaggcactcataaagatgaacgcaaagaaaga
gggaagagcaaggaaagaacaagagagagactgagatctgttaaaagagacagggataaa
atgagagaaaggggaaaagaacaccgcagagatcaagacagagagagacatcaagataag
cttaaagagtcaagtttagagaaggaaagatacagtgtaccgaaagataaagacagggag
agcaatagagaacgtgataaaatgcataaaagacatgagataaagcaaccagatatgcat
aatgatctgaaatcatttgaaggaagagataaaggacatcacagaagaagagaaaaaagc
aggcatcgtttggaagaggaaaaaacaagaggtgaagagcgagaaaggagacatacaggg
aagaaggataataatacgaaaaccagcattgacgcgtttttagcagacagatgtggagga
ggtgaacatggacacaagttacagaaagatgaagaactgaataaagaagaaaagaagaga
tacagggaaaaaatagaacattccatcaggccaggaaaagacagactttcaaaagagaga
agtcataaatcttacaaaaaagaagaggaagaacgacataagtcaaagagatctgtggag
gaacatccccatggacacagaggacgaccagcagaagataggaagagagtaaaaagtggg
gaaaatgaaagaaagaagctcgatcttaggaagagtgaacacaaaacagaggaggagaat
caaggagaagaaatgagccatgagcatataagtaggactggaaaagataagggaaaaatc
agtgaaaaagagaaaagagatgcaagtcaagaggaggtcaaaggtacacacatctgtcat
tcagacccagagctgggtaacttttcagcagattacgaagatgattttgaagattatgaa
gatgattttgatgattatgatgaagacaaaagcgaagaaggcgatactgaagacaaacta
agagagattcatttttccaagccatcagaaattgaagaaattcaaagagcaattaatgca
gaaaatgatagaatctgtacttcactgccactgaaaaccagaaatgaaaaacaggaaccc
gtcatggaaacacaatactctcctgccagaaactcttttcgtggaatattcatggatttt
gaaacagcacatcaaagacaaagtagccagagtatggctagtaagcagaaaaaacggagt
gcagagcttctcccacttattgatctggacttttcagttagtttttctttattggatttg
cctcctgtaaatgagtatgacatgtatatcaggaactatggtaaaatgaacactaagcag
gcctatgttcagtgtaacgaggacaatcttgacagagacattcagactgaggaggttgag
acattggagaaatggacacagcatccaggagaaagtgcccttgtatctggaggtcccata
aatggccaggagatgtcagcaaatggagctcaatcgcccaaaattgattcactaagatta
gcaaatttccttcgatcagcagcccaggtgattgctgttttgctagaggaagatcaagct
gcagcacaacccagatggaaacaaagatctcaacaaaccagtctgtctattagtgatagc
tgtttccagttaaatactaaccaaccattcctccatgaccggaagatatcctgcctatat
gtctctcaagttcagaggcaggcactgctttctgttcacggattacctgaaaaagcaggt
gttgctttactgaacagaaagagcatcatatgtgtttggaacatttggcagccctccagt
cctcagaaagttttaatatgtgactccgaggtcttatgttgctgctttagtcccagtaaa
acaacgttagtttttgctggaacagtggatggttcattgttggtgtgggatcttcgagaa
gacacaagaatgcatcctcacatcacattcagtgaaactgattggacgtttagggttcca
acgttctccactgatggtattctaaattcagtcaaccacacctctcctatactagcagtg
gaacctgtctcaactctgtatgctgaacagaattatggtctcgcaagcctctttcatcag
gaggaaatgtcaggccctccgtttcagatagcttcaatggatgaaaatggaatccttaac
acgtgggtagttgtagaattacagaaagtggatttagctggttcacaaactgatttaggc
ttaattcctggagggaaagtgaagttagtacatagctctgccatggaactgaataagagt
cttttcccaaaggatgtgtgcctgagaatgcctcaaacactgacagttaaatttctgcca
tctgatccaaatcatttcattgttggaacaaatgttggcctggtaggccgtggtacaaga
catgatgtaaaagttcttccaaagctattcagaccccaggagagtgggataagatcaata
agcatcaatgcaattgatttcttcccttatggaaagccactctttttggttggctgttca
gatggaagcattagattgcaccagatgacatcagagtatcccctcatgcagtggaatgac
agcacaaatgggcagccagttattgccctgcagtgggctttaacaagacctgctgtgttt
tttgtcctcgacgcatcgtctaatatttacatctgggatcttctggaaagtgatttgttt
cctgtggcaaagcaaactattccgtcagagaatgttataactatggctctacttggagaa
ccagaaaaaacaaatggattgttaggaattgtgctggccaacaactctggagagatagac
attcactatataaagaagaagtgggcattacctcagccagaggaatctgaaaaactcaat
ttgattctgttgcgctcttgttag
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