Lagopus muta (rock ptarmigan): 125695841
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Entry
125695841 CDS
T09141
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125695841 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125695841 (PEX1)
Membrane trafficking [BR:
lmut04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125695841 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RNA_helicase
RuvB_N
DUF815
ABC_tran
NACHT
AAA_22
AAA_5
TIP49
AAA_28
Sigma54_activat
AAA_33
AAA_29
AAA_18
AAA_2
AAA_19
Sigma54_activ_2
AAA_7
Bac_DnaA
ATPase
APS_kinase
CoaE
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
125695841
NCBI-ProteinID:
XP_048806783
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All DBs
Position
7:complement(22579136..22599649)
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AA seq
1290 aa
AA seq
DB search
MWGSGNPGGGGAGVAAATVVLSGTRDCFLHLPAVLASHLRLQQGQAVKVSCGDEPIYLSW
MEIRHRGHRSENIAEMNRHLAEKLGIADGEQIFLEPCLHVSSCQQVEVEPLSADDWEILE
LHAPSLEKHLLDQIRIVFPKAIFPVWVEHHTHVYIRIGTLVPAAPYGRLEPCTELLICPK
ARELEENIIDMPSTESDILLKSFVKNNMQQDETVKEPFASQPQLNPGVPEQSKADANVTF
GSNVLPNMWNFIGSIFSRTAEQKQKTLCDKDEMSTFKDKLLNLIHVDSIFRVSQSQPPSV
QNASALHAFLKYNAVHIFPWNIEFTDLDPNAVVSYGKINKLLSPRQRHQEAKQNLPSEKQ
KHLPGTQDKNDSNTIQASSGGSVVQIVWNGFEDLKSVIEYGNSGEALHVGRVWIPDDLRK
KLRIEMHSAVQIKSLESIPKIPISLRLQPKQNLHKDTCEDDVKCAFSAWLKDSATEDLPW
IMTSTNCIHLRIKEGMEEFVLTVVDHVHTEEDKSENTFILSPSLLQKTNIQVLLHPLTAK
ADDDSQLPVRETDRNLPYKRLNHLGGVDKLGASSYEHISHSLLGRPLSQKLAGIAVGLRS
GGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGSIRKNVEEAFLEAS
WRQPSVILMDDLDHIVGVPPTPEHENSPESVQSSRLAYVLKDLIKEVISLGSLIALIATS
QSEHALHPSLVSAQGTHIFQCFKHIQSPDQKQRCEVLCSVINNKLNCDVEKFSNLDLQYV
AKETEGFVARDFTMLVDRAIHACISNQDAFQHGELNLSTVDFQKALKDFTPLALRNVSLH
KPKDVGWDRIGGLKDVKQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAG
VVARESRMNFISVKGPELLSKYIGASEQAVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHD
NTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDLSS
RCEILKALSHSLSLADDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNLSSGLTQDFGS
SSDSDFSLSSMVFLNHSSGSDDSAIDGEAAPEQSLISLDMSELLPEDPRSNMYRLYFGSS
YESELGNGSPSDLSSLCLSGPNSVTHDFTNISQRDTASSQPSMLTTVSQEDSLENNPEQQ
IEHLRTEINAIKANYKSKNGEDGTLNQSVLAKNTLIITQSHLMTALEGIRPSISQDDWKN
FTELYDNFQNPKRKGQVGSAFRPGQKMTLA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcaaccccggcggagggggcgccggagtcgccgcggcgacggtcgtg
ctgagcgggacccgggactgcttcctgcacctgcccgccgtgctggcctcgcacctccgc
ctgcagcagggccaagctgtgaaagtatcctgtggtgatgagcccatttacttgagctgg
atggaaataaggcatcgaggtcatcggagtgaaaatattgcagagatgaacaggcattta
gcagagaaacttggcattgcagatggagaacagatattcctggaaccctgtttgcacgtc
tcctcctgtcagcaagtagaagtggaaccactctcagcagatgattgggaaatactggaa
ctgcacgctccctctcttgaaaagcatcttctggaccagatccgaatcgtattcccaaaa
gccatctttcctgtatgggttgaacaccacactcacgtttacatcagaattggtacactc
gtgccagcagccccctatgggagattagaaccatgcacagagctgctgatatgcccgaaa
gcacgtgagcttgaggaaaacatcatagacatgccttctacagaaagtgacatcttactc
aagagttttgtgaaaaataacatgcagcaagatgaaactgtaaaggagccttttgccagt
caacctcagttaaatccaggagtcccagaacagagtaaggctgatgcaaatgtgacgttt
ggctcaaatgttctcccaaatatgtggaatttcatagggagcattttctctcgtacagct
gaacagaaacaaaagactttgtgtgataaagatgaaatgagcaccttcaaagacaagctg
ctgaacttaattcatgtggattccatttttagagtatctcagtcccagcctcccagcgta
cagaatgcatcagcccttcatgcatttctgaaatacaatgccgttcatatttttccatgg
aatatagaatttactgatttggatccaaatgctgtagtttcttacgggaaaataaacaag
ctgctttcccccagacagcgtcatcaagaagcaaagcaaaatctgccatctgaaaagcaa
aaacatttgcctggtacgcaagacaaaaatgattccaataccattcaagcatccagtggg
ggatctgttgttcagatcgtttggaatggatttgaagacctaaagagtgtcatagagtat
ggcaacagtggggaagccctacatgttggaagagtttggattccagatgacctgagaaaa
aagctacgaattgaaatgcattcagcagtccaaattaagtcacttgagtctattcctaaa
attcctatatctcttagactgcaacccaaacagaacttacataaagatacatgtgaagat
gatgttaaatgtgctttcagtgcttggctaaaggattctgctactgaggatcttccatgg
ataatgacaagcacaaactgcatacatctgcgtattaaagaaggaatggaggagtttgtc
cttactgtagtggatcacgtgcacactgaagaagataagtctgagaatacttttatactg
agtcccagtttgctgcaaaagactaatatacaagttcttttacaccctctaactgcaaaa
gctgatgatgacagccagctgcctgtgcgtgaaacagacagaaaccttccttacaaaaga
ctaaaccatttagggggagtggacaaattaggagcatcttcttatgaacacataagccac
agtcttttgggtcgtcctttatctcaaaagctggctggtattgctgtgggactgcgaagt
ggaggggtgcttctcacaggaggaaagggaagtggaaaatcaacattagcaaaggccatc
tgcaaagaagcatttgatagattggatgctcatgtagaagtaattgattgcaaagcttta
agaggaaaaagattaggaagcataaggaaaaatgtggaggaagcttttttagaggcgtca
tggagacaaccatccgttattttaatggacgatcttgatcacattgttggagtacctcct
acaccagagcatgagaacagccctgagtcagttcagagcagcagacttgcttatgttttg
aaagatctgataaaagaagttatttccttggggagtttgattgcattaattgctacaagt
cagtctgaacatgctctacatccttccctggtttcagctcaaggaactcatatatttcag
tgtttcaaacatatccagtcaccagatcagaagcaaaggtgtgaagtgctctgttctgta
ataaacaacaaactgaactgcgatgtagagaagttctccaatcttgatctccagtatgtt
gcaaaagaaacagaaggttttgttgctcgagattttactatgctggttgatcgtgccatt
catgcctgtatttctaaccaggatgcatttcaacacggcgaattgaatctgtcaaccgtg
gattttcagaaagctttaaaagattttactccattagctctgagaaatgtcagccttcat
aaacctaaggatgttggctgggataggataggtggcttaaaagatgtgaagcaaatactc
atggataccatcatgttacctgcaaagtatccagaattatttgcgaacctgcctatacga
cagagatcaggagtcttgctctatggagcacctggaacaggaaaaacactgttagcagga
gtagttgctcgagagagcagaatgaatttcatcagtgtcaaaggaccagagctgctcagc
aaatatattggagcaagtgaacaagcagttagagatatctttaacagagctcaggcagcc
aaaccttgcattgttttcttcgatgagtttgattccattgctcctcgccgaggtcatgac
aacactggagttacagaccgagtggttaatcagctgttgactcagttggatggtgtggaa
ggtttacaaggtgtttatgtgctagctgctactagtcgcccagatttgattgatcctgct
ttgttaagacctggtcgactggataagtgcctgtactgtcctcctccagatctgagttca
cgctgcgaaatcttaaaagctctcagtcattctctgtccttggcagatgatgtggacctt
gagtatttggctgcaaaaacagagcacttcacaggggctgacctaaaagctttattatac
aatgctcagttggaggcaatacataatttaagctcaggtttaacacaggattttggttct
agttctgatagtgacttcagtctgtcttccatggtttttctaaaccatagcagtggttca
gatgactcagcaatagatggagaagcagcacctgagcaatctcttatttctttggacatg
tctgagttgcttcctgaggatccaaggtccaacatgtatcgtctttattttggaagctct
tatgaatcagaactaggaaatggaagtccttcagacctgagctctttgtgtttgtctgga
ccaaactctgtaactcacgattttaccaacatctctcagagagacacagcatcatcacaa
ccttcaatgcttacaacagtctcccaagaagactcactggaaaataacccggagcagcaa
atagagcacctgaggacagaaatcaatgctatcaaagccaattacaaaagcaagaatgga
gaggatggcacccttaatcagtctgtgcttgccaagaacactttaattattacccagtcc
catttgatgactgctcttgagggtataagaccatccattagccaagatgactggaagaat
tttactgaactgtacgataattttcagaatcccaagaggaaaggacaagttgggtcagca
ttcagaccaggacaaaaaatgactctagcatag
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