KEGG   Lagopus muta (rock ptarmigan): 125695864
Entry
125695864         CDS       T09141                                 
Symbol
ITGA8
Name
(RefSeq) integrin alpha-8 isoform X1
  KO
K06584  integrin alpha 8
Organism
lmut  Lagopus muta (rock ptarmigan)
Pathway
lmut04510  Focal adhesion
lmut04512  ECM-receptor interaction
lmut04514  Cell adhesion molecules
lmut04810  Regulation of actin cytoskeleton
lmut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125695864 (ITGA8)
   04514 Cell adhesion molecules
    125695864 (ITGA8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125695864 (ITGA8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125695864 (ITGA8)
   04810 Regulation of actin cytoskeleton
    125695864 (ITGA8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lmut04515]
    125695864 (ITGA8)
Cell adhesion molecules [BR:lmut04515]
 Integrins
  Integrin alpha subunits
   125695864 (ITGA8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 DUF5944 LYRIC
Other DBs
NCBI-GeneID: 125695864
NCBI-ProteinID: XP_048806845
LinkDB
Position
7:20294926..20390699
AA seq 1046 aa
MRMPRRQPPRPLLLLSALLCAPASAFNLDEEKLTVYSGPPGSYFGYSVDFYIPDPSTVSV
LVGAPRANTTQPDIVEGGAVYHCGWPAARCRQIPFDNTNNRKIKVNGTREPIEFKTNQWF
GATVKAHKEKVVACAPLYHWRTLKDSPEKDPVGTCYVAIQNFSAYAEYSPCRNSNADPEG
QGFCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASIADIIANYSFKDILRKLAREKQTG
VAPPTYDDNYMGYSVAAGEFTGDSEEELVAGVPRGAQNFGYVSIINSSDLTFIQNFTGEQ
MASYFGYTVAVSDVNNDGLDDILVGAPLFMEREFESKPKEVGQVYLYLQETAFLFRDPQI
LTGTEVFGRFGSAITHLGDLNQDGYNDIAIGAPFAGEDRRGKVLIYNGYSNGLKTHPSQV
LNGAWASQSMPSGFGFTLRGDSDVDKNDYPDLIVGAFGAGKAVVYRARPVVTVNALLILN
PMIVNPDNKTCQPPGSQILVACFTIRVCAAFEGQSISDEIALKGELQLDSLKQKGAVKRT
LFFDYHQSHHYFSIVMEKQKKLYCQDFLVYLRDETEFRDKLSPININLNYSLDESHFKDS
MMVKPILNYYQRSSVTEQAYILVDCGEDNLCIPDLHLSAVPDKDQLIIGEENCVMLIINP
RNDGEGAYEAELHIKIPPEADYTGVERNSKALRVLSCDYKMENETRMVVCDLGNPMVAGA
NFSTGIRFSVQHFENSDFSINFELQIKSSNKVNSTSNLVNLHINITAAAQVQVRGVSHPP
QIVLPLHNWEPKDEPTKEEEIGPLVEHIYELHNIGPSAINNTVLHVGWPVSSHEEFLLYI
LHIQTHGPLHCQTSSPINIMQINFAIPQDTPELAAFLYNSTISHYIRRREVAMAEPYRRN
SARILNCTNVKCILISCSVGQLERGKSAALKIRSRLWAETFLQRKNNPYTLSSNVSFKVK
NMPYKVQPAKLPEGSTAIRTSVIWSTPNVSFVIPLWVIILAIMLGLLVLAVLTLALWKCG
FFDRARPPQDDVADREQLTNNKTTDA
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgaggatgccgcgccggcagccgccgcgcccgctgctcctcctgtcagccctgctctgc
gcgccggcgtcggccttcaacctggacgaggagaagctgacggtgtacagcgggccgccc
ggcagctacttcgggtactcggtggacttctacatccccgaccccagcacggtcagcgtc
ctggtgggagctccgcgagccaacaccacgcagccggacatcgtggaaggaggagcggtg
tatcactgcggctggccggccgcgcgctgcaggcagatccccttcgataacaccaacaac
aggaaaattaaggtcaatggcaccagggaaccaattgagtttaagacaaatcagtggttt
ggggcaacagtcaaagctcataaagaaaaagtcgtggcttgtgctcccttatatcattgg
aggactcttaaagacagcccagagaaggaccccgttggcacctgctatgtagcaattcag
aacttcagtgcctatgctgaatactcaccttgtcgcaacagcaatgcagatcctgaagga
caaggcttttgtcaagcaggtttcagcttagatttttacaagaatggagacctcatagta
ggcgggcctggtagtttttattggcaaggtcaggtaatcactgcaagcattgcggatatc
atcgcaaattattccttcaaggatattctgaggaaactggcacgagagaagcaaacagga
gttgcaccacccacatatgatgacaactatatgggatactcagtagctgctggggaattt
actggagattctgaagaagagctggttgctggagtcccaaggggtgcacagaactttggc
tacgtctcaatcattaattcttcagatttgacctttatccagaatttcaccggtgaacag
atggcgtcttattttgggtacactgttgcagtatctgatgttaacaatgatggtttagat
gatatcttagttggggcccctctgtttatggaacgagaatttgagagcaagcctaaagaa
gttgggcaagtctatctgtacctgcaggaaactgctttcctcttccgagatccgcaaatt
ctgacaggcactgaagtgttcggcagatttggcagtgcaatcactcaccttggagatctc
aatcaggatggatataatgacattgccattggtgcaccatttgcaggtgaagacagaaga
ggtaaagtgctcatttacaatggatacagtaatgggttaaaaactcacccttcccaggtt
cttaatggagcctgggcctcacagtccatgccttcaggatttggcttcactctaagagga
gactcagatgtagacaagaatgattacccagatttaattgtaggtgcgtttggagctgga
aaagcagttgtttacagagccagaccggttgtgactgtgaatgctctgctcattttgaac
ccgatgattgtgaatccagacaacaagacttgtcagccccctggctctcagattttggtg
gcctgttttaccataagagtctgtgcggcatttgaaggccaaagtatttcagatgagata
gcgctgaagggtgaattgcaattagattcattgaaacagaaaggagctgttaaaaggact
ctcttctttgattaccatcagtcacatcattatttctccattgtgatggaaaaacagaag
aagctctattgccaggactttcttgtttatctcagagatgaaacagaatttagagataaa
ttatctcccatcaatataaacttgaattatagcttggatgaatcccatttcaaagatagc
atgatggtgaagccaatactgaattactaccagagaagctcagtaacagaacaggcttat
attctggtggactgtggggaggacaacttgtgcattcctgacttgcacctttccgctgtg
ccagataaagatcagctaataattggagaagaaaactgtgtcatgctcataataaatcca
aggaatgatggggaaggagcctatgaagctgagctgcatataaagattccacctgaagca
gattacactggggttgaacgcaacagcaaggcactgcgtgtgttgagctgtgattacaag
atggaaaatgaaactagaatggtggtttgtgatcttgggaaccccatggtggctggcgca
aatttctctacaggtatccggttttctgttcagcattttgagaattcagatttcagcatc
aattttgagctgcaaataaaaagttctaacaaggttaattccaccagcaatttagttaac
cttcatatcaacatcactgctgcggctcaggtgcaggtcagaggagtctctcacccacca
caaattgttctgcctcttcacaactgggaacccaaagatgaacctacaaaagaagaagaa
attggtccattagttgaacacatctatgagcttcacaatataggaccaagtgccatcaac
aatacagttctccatgtcggttggcctgtgtccagtcacgaggagtttcttctttacatt
ctacatattcagactcatggaccactgcactgtcaaacaagctctcctattaatatcatg
caaatcaattttgctattccacaggacactcctgaacttgctgcttttttatataattcc
acaatttctcattacatcaggagaagggaggtagccatggcagaaccttacaggaggaac
tctgcaagaatactgaactgtacaaatgtgaagtgtatcctcatttcctgcagtgtggga
caactggaaagagggaagagcgcagcactgaaaatcaggtcccggctatgggctgaaact
ttcctgcagaggaaaaataatccctatactctttcttccaatgtgtccttcaaagttaag
aacatgccctataaagtgcagccagcgaagctcccagagggaagcacagcaatcagaaca
tctgtcatttggtccactccaaatgtctcctttgtcattcctttgtgggttataatacta
gcaataatgcttggtctgctggtactagcggtgttgacccttgctttatggaagtgcggc
ttctttgacagagcaagacctcctcaagatgacgtggcagacagagaacagctgacaaat
aacaagactactgatgcatag

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