Lagopus muta (rock ptarmigan): 125696001
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Entry
125696001 CDS
T09141
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125696001 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125696001 (MID1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125696001 (MID1)
Ubiquitin system [BR:
lmut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125696001 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125696001
NCBI-ProteinID:
XP_048807102
LinkDB
All DBs
Position
1:123608363..123856430
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AA seq
695 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCASNEPVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKELTAFWSPDLAEISGAVTVS
LCSTVVGQQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQETKLMEECDQLIEI
IQQRRQIIGTKIKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQSLKENDHARFLQTA
KNITERVSMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTAPNPPTIREELC
TASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHG
LQSGTKYIFIVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDETS
SKKSHTPERFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGISYKSAPKHEWIGKNS
ASWVLCRCNNTWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSLAFYDALNSLHLYTFDIT
FGQPVCPTFTVWNKCLTIITGLPIPDHLDSSEQLA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaggacccg
ctgctgctgccctgcgctcacagtctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgcctccaacgagccggtggagtctatcaccgccttccagtgccccacctgccgc
tatgtcatcaccctcagccagcgtggtctagaggggctcaagcgcaacgtcaccctgcag
aacatcatcgaccgctttcagaaagcctcggtgagtgggcccaactcccccagtgagacc
cgtcgggagcgggcattcgacagcaacagcatgtcctcctgtgagaaggtcctctgccag
ttctgtgaccaggaccctgcccaggaggcagtgaagacatgcgtgacttgcgaggtctcc
tactgcgaggaatgcctgaaagccacgcaccccaacaagaagcctttcaccggccaccgg
ctgattgagcccatcccggactctcacatcaggggattaatgtgcttagagcacgaggat
gagaaggtgaacatgtactgcgtgacggacgaccaactgatctgtgccctgtgcaagctg
gtcgggcggcaccgagaccatcaggtggcagctctaagtgagcgctacgacaagctgaag
gaactaaccgcattctggagtccagaccttgctgagatttcaggagctgtgacagtatca
ctctgtagtacagtggtaggccagcaaaatttggagagtaacctcaccaaccttattaag
aggaatactgaactggaaactcttctggcaaaactcattcagacctgtcaacatgtagaa
gtgaacgcatctcgccaagaaaccaagctgatggaagaatgtgaccagcttattgaaata
atacaacagagacgacaaataattggaaccaaaatcaaggaaggaaaggtggtgaggttg
agaaaactggctcagcagattgcaaactgcaaacagtgcattgagcgctcgacgtccctc
atctctcaggctgagcagtcgctgaaggagaatgatcacgctcgcttcctacaaacagct
aaaaacatcaccgaaagggtttccatggcaactgcatcctcccaggttctaattcctgaa
attaatctcaacgatacttttgatactttcgcacttgattttaccagggagaagaaattg
ttagaatgccttgattatcttacagctcccaaccctcccaccattcgagaagagctctgt
acagcttcttatgatactattactgtccactggacatcagatgatgagttcagtgtggtc
tcttacgagcttcagtacaccatcttcactggacaagctaacgttgtcagtttatgtaac
tcagccgacagctggatgattgttcccaatatcaaacaaaaccactacaccgtgcatggg
ttacagagtggcacaaagtacatcttcattgttaaggccattaatcaggctggcagcaga
agcagtgagccaggcaagctcaagacaaacagtcagccatttaaactggaccccaaatct
gctcatagaaaactgaaagtgtctcatgacaacctgacagtggaacgtgatgaaacctcc
tccaaaaagagtcatacaccagagcgattcacgagccaagggagctatggagtagctggc
aatgtgttcattgacagcggacggcattactgggaagtggttataagtggcagtacgtgg
tatgccatcggtatttcatacaagtcagcaccaaagcatgagtggatcgggaagaactct
gcctcttgggtgctgtgccgctgcaacaacacttgggtggtgagacacaacagcaaagaa
atcccaatagagcctgcaccccatctccgccgggtcggcattttgctggactatgacaat
ggttcccttgctttttatgatgccttgaactccctgcacctttacacctttgacattaca
tttgggcagcccgtatgccccacattcactgtgtggaataagtgtttaaccattataaca
ggcttgcccatccctgatcacttagactcctctgagcagctggcatga
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