Lagopus muta (rock ptarmigan): 125696106
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Entry
125696106 CDS
T09141
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmut03032
]
125696106 (TOP2B)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125696106 (TOP2B)
Enzymes [BR:
lmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
125696106 (TOP2B)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Topoisomerases
125696106 (TOP2B)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
125696106 (TOP2B)
Centrosome formation proteins
Centriole proteins
125696106 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
ELP3_N
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
125696106
NCBI-ProteinID:
XP_048807318
LinkDB
All DBs
Position
7:complement(37234366..37292267)
Genome browser
AA seq
1622 aa
AA seq
DB search
MAKSGGGGGGGGGGSGGLTWVTLFDNQINASKKEESESVNKNDTSKKMSVERVYQKKTQL
EHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDK
NMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTG
GRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEPKIKHFEGDDYTCITFQ
PDLSKFKMEKLDKDIVSLMTRRAYDLAGSCKGVKVMLNGKKLPVNGFRSYVDLYVKDKLD
ETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEV
VKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQPKSFGSKCQLSEKFFK
AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSLDCTLILT
EGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKK
SYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKA
SKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRY
VGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFIN
KELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHG
EQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPS
VDDNLLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRML
DGLDPHPMLPNYKNFKGTIQELGQNQYVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVL
EPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSM
VLFDHMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQ
GKITIENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNPNDDASSASGSTSGP
DFNYILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSASDLWKEDLAAFVEELEKVEA
QEREDVLAGMVGKPIKGKVGKPKMKKLQLEETMPSPFGRRIVPQITSAMKADASRKLLKR
KKGDADSVAIKMEFDEEFGGVQTEGGGDDSVNTAASATKIPKLKREKKEPGTRVRRAPSS
TKSSAKKVKKRNPWSDDESKSESDLEESEPVIIPRDSLLRRAAAERPKYTFDFSEEEDDA
DDDDDANNNNDLDELKVKASPVINDREDEFVPSDSLEKDEYDFSPVKSKPSPDRKMSQEK
KNQDFGNIFSFPSYSQKTDDDTTKLDSDEEDSTPVFSSPFAPKQTEKILSKTVAAKKAKV
DVPPKPKRAPKAKKMETVNSDSDSEFGIPKKTAAPKGKGRGAKKRKASSSENEGEYNPGK
KTPKSTPCKKSKKATFDQDSDVEIFQSGFASETAPKPRTGRARKEVKYFAESDEDDDFDM
FN
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtccggaggaggaggaggaggcggcggcggtggcagcgggggactgacctgg
gtgacattatttgataatcaaatcaatgcttcaaaaaaggaagaatcagaaagtgttaat
aaaaatgacacttcaaagaagatgtctgttgagagagtttatcagaaaaagactcagctt
gaacatatcctcctccgtccagacacctacattggatcggttgaacctttaactcagtta
atgtgggtttatgatgaagatgtcggaatgaattgcagagaggttacctttgtccctggc
ttatacaagatctttgatgaaatccttgtaaatgccgctgacaataagcagagggacaag
aatatgacctgtattaaaatatccattgatccggaatcaaacattatcagcatatggaat
aacgggaagggtataccagttgtggaacacaaagtagaaaaagtttatgttcctgcttta
atctttgggcagctgttaacatctagcaactacgatgatgatgagaaaaaagttacaggt
ggtcgtaatggctatggcgcaaaactttgtaacatatttagtacaaagtttacagttgaa
actgcttgcaaggaatacaaacacagcttcaagcagacttggatgaacaatatgatgaag
acttctgaacccaagattaagcattttgaaggtgacgactacacatgcattacattccaa
ccagatctatctaaatttaaaatggaaaaacttgacaaggatattgtgtccctcatgaca
agaagagcatatgatttggctgggtcatgcaaaggagtcaaagttatgttgaatgggaag
aagttacctgtaaatggatttcgcagttacgtagatctttacgtaaaggacaagctggat
gaaactggagttgcactcaaagttattcatgaagtcgtgaatgaacgatgggatgtgtgc
ctaactttaagtgagaaaggatttcagcaaatcagctttgtaaatagtatagctactaca
aagggtggtaggcatgttgattacgtggtggatcaggttgtgggcaaactgatagaagtg
gtaaaaaagaagaataaagctggagtttcagtgaaaccatttcaggtgaagaatcatata
tgggtttttgttaattgcttgattgaaaacccatcttttgattcccagacaaaggaaaac
atgacattgcagcctaaaagttttgggtccaagtgccagctatctgagaaattttttaaa
gcagcctctaactgtggtatcatagagagtattttgaattgggtcaaatttaaggcacag
actcagctgaacaaaaaatgctcatctgtgaaacacagtaaaatcaaaggcattccaaaa
ctggatgatgctaatgatgcaggtggcaaacattccttggactgcacactaatattaaca
gaaggagactctgccaaatctttagctgtctctggcttaggtgttattggtcgagacaga
tacggagtattcccactcaggggtaaaattctcaatgttcgagaagcttctcacaagcag
atcatggaaaatgcagaaatcaacaacatcatcaaaatcgttggactgcaatacaagaaa
agctatgaagatccggaatctctaaaaagtctgagatatggaaaaattatgataatgaca
gatcaggatcaggatggatctcacataaaaggcttgttgatcaattttattcatcacaat
tggccatcactgttgaaacatggttttcttgaggaattcatcactcctattgtaaaggca
agcaaaaataagcaagaactttcattctatagtattcctgagtttgacgagtggaagaaa
cacatggaaaatcataaagcatggaagataaaatattacaaaggtttgggtaccagcact
gctaaagaagcaaaagagtattttgctgacatggaaagacatcgaattttatttcgatat
gttggtcctgaagatgatgctgccattacactggccttcagtaaaaagaagatcgatgat
cgaaaagaatggttgacaaacttcatggaggacaggcgacagcgtcggctacatggcctt
cctgagcaatttttatatggtacagcgacaaaacatttgacctacaatgacttcattaac
aaggagttgatcctcttctcaaattcagacaatgaaagatctattccctcccttgttgat
ggtttaaaaccagggcagcgcaaagtgttgttcacttgctttaagagaaatgataaacgt
gaagtaaaggttgctcagctggctggttctgttgctgagatgtcagcttatcaccatgga
gagcaagcactaatgatgaccattgtcaacttggctcagaacttcgttggaagtaacaat
gttaatcttctacaacctattggtcagtttggtaccaggcttcatggtggaaaggatgct
gccagccctcgctatattttcactatgctaagccctttagccaggcttctttttccatca
gtggatgacaacttgctgaaattcctttatgatgacaaccaacgtgtagagcctgaatgg
tatatccccatcattccgatggttttagtaaatggagctgaaggaattggtactggatgg
gcttgcaaacttccaaactacgataccagagagattgtaaacaacgtcagacgaatgctg
gatggcttagatccccatcctatgctcccaaactacaaaaacttcaaaggaaccattcaa
gaacttggtcaaaaccagtatgtagtcagtggtgaaatatttgtggtggacaggaacact
gtagaaattacagagctacctgtaaggacatggacccaggtttacaaagaacaggttcta
gaacccatgttgaatggaacagaaaaaactccagcattaatctctgactacaaggaatac
cacacagatacaactgtgaaatttgttgtgaagatgacagaagaaaagcttgcacaggca
gaagctgctggattgcacaaagtctttaagcttcaaacaagtcttacttgtaattctatg
gtgctatttgatcatatgggatgtttaaagaagtatgaaactgtgcaagacattttgaag
gagttctttgatttgcgattacattattatagtttacgtaaggaatggcttgtgggaatg
ttgggtgctgaatctacaaagctaaacaaccaagctcgcttcattctggagaagatacaa
ggaaaaattaccatagagaatagatcaaaaagagatttgattcaaatgttggttcagagg
ggctatgaatccgatccagttaaagcttggaaagaagcacaggaaaaggcagcagaagag
gaggacccacaaaacccaaatgatgatgcttcctctgcttctgggtcaacttctggccct
gattttaactatatcttaaacatgtctctgtggtcacttacaaaagagaaagtggaagag
ctgattaagcacagagattcaaaggagagagaactaaatgaccttaaaaggaaatctgct
tcagacctctggaaagaagacttagcagcttttgttgaagagcttgaaaaagtggaagca
caggaaagagaagatgtcctggctggtatggttggcaaaccaataaaaggtaaagtcggt
aaacccaagatgaagaaacttcagttggaagagaccatgccatcaccatttggtagaaga
atagttccacagattacatctgccatgaaagctgatgccagtaggaaattgctgaaaagg
aaaaagggtgatgctgattctgtagcaataaaaatggaatttgatgaagaatttggtggc
gtgcaaactgagggtggtggggatgactcggtgaatacagcagcctcggcaactaaaatc
cctaaactgaagagagagaagaaggagcctggtactagagtaagaagagcaccatcatct
acaaaatccagtgcaaaaaaagtgaagaaacgaaacccctggtcagatgatgagtccaag
tctgaaagtgatttagaagagagtgagcctgtgattattccaagagactctctgcttagg
agagctgcagctgagaggcctaagtatacatttgacttctcagaagaagaagatgatgct
gatgatgacgacgatgccaacaataataatgatttagatgagcttaaagtaaaagcctct
ccagttataaatgacagagaggacgagttcgttccctcagacagtttagaaaaagatgaa
tatgacttctctccagtcaaatcaaagccatctccagatagaaaaatgtctcaagagaag
aaaaatcaagactttgggaacattttctcattcccatcttactctcagaagacagacgat
gatacaacaaaattggacagtgatgaggaggattctactcctgttttctcatcacctttc
gccccaaaacaaacagagaaaattctaagtaaaacagtagctgctaaaaaagcaaaagta
gacgtaccacctaaaccgaagagggctcccaaggccaagaagatggaaactgtaaattct
gactcggattcagaatttggcattccaaagaagactgcagcacccaaaggaaaagggaga
ggggcaaagaaaaggaaagcatcaagctcagaaaatgaaggtgaatacaaccctgggaag
aagacacctaaatcaacaccatgcaagaaatccaagaaggccacttttgaccaggattcg
gatgtggaaatcttccagtcaggctttgcctctgaaactgccccaaagccccggacaggc
cgggctaggaaagaagtgaaatattttgcagagtctgatgaagatgatgattttgatatg
tttaattaa
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integrated database retrieval system
