Lagopus muta (rock ptarmigan): 125696148
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Entry
125696148 CDS
T09141
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125696148 (SNRPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmut03041
]
125696148 (SNRPD1)
03032 DNA replication proteins [BR:
lmut03032
]
125696148 (SNRPD1)
Spliceosome [BR:
lmut03041
]
Complex A
U1 snRNP components
Sm proteins
125696148 (SNRPD1)
U2 snRNP components
125696148 (SNRPD1)
Complex B
U1 snRNP components
125696148 (SNRPD1)
U4/U6.U5 tri-snRNP components
125696148 (SNRPD1)
Complex C
U2 snRNP components
125696148 (SNRPD1)
DNA replication proteins [BR:
lmut03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125696148 (SNRPD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
YomU_Tube
Gemin7
Hfq
AAA_RNF213_3
Phage_Hfq
SM-ATX
API5
Motif
Other DBs
NCBI-GeneID:
125696148
NCBI-ProteinID:
XP_048807401
LinkDB
All DBs
Position
7:complement(42068574..42072924)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttctgatgaagctgagtcacgagactgtgaccatcgagctgaag
aacgggacacaggtgcatggcaccatcacaggagtggatgtcagtatgaatactcatctc
aaggctgtgaaaatgacactgaagaacagggagcctgtacagctggagacgctgagcatt
cgggggaataacatccgatacttcattctgccagacagtttgcccctggacaccttgctc
gtggatgttgaaccaaaagtcaagtccaagaaaagagaagcagttgctggaagaggccgt
ggccgaggccgcggaagaggccggggccgtggaagaggaagaggaggcccaagacgataa
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