Lagopus muta (rock ptarmigan): 125696158
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Entry
125696158 CDS
T09141
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125696158 (TRDMT1)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
125696158 (TRDMT1)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125696158 (TRDMT1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
125696158
NCBI-ProteinID:
XP_048807415
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Position
7:19787927..19815704
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AA seq
398 aa
AA seq
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MAALRVLELYSGIGGMHQALKESCVCAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGI
ALKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHHEPFFFHVPG
QILTRFPDQNLEELSKDEVVDEASSSLPSGEKSLLSNTGSDCSSKNGPLPKEAFLFKLET
VEEMIRKHSQDNDPSIQMLQDFLEDENEEMSQYFLAPKSLLRYAFLLDIVKPTCRRSTCF
TKGYGHYVEGTGSVLQTAVDVQLESVFKHIENLTEEEKLMKLSTLKLRYFTPREIANLHG
FPPEFGFPDKVSIKQCYRLLGNSLNVHVVAKLISILLG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctacgggtgctggagctgtacagcggcatcggggggatgcaccaggccctg
aaagaaagctgtgtatgtgcagaagttgttgctgctgtggatgtgaacacccttgccaat
gaagtttataagcacaactttcctagcacaccattatgggcaaagacaattgagggaatt
gcactgaaagaatttgacagattatcttttgatatgattttgatgagtcctccctgccag
ccgtttacaagaattggcctacaaggtgatgtatctgatccgaggacaaagagctttctt
tatattcttgatattctcccaaggctccagaagcttccaaaatacctacttttagaaaac
gttaagggatttgaatcctcttctgcaagaaatgaacttctgcgaacactagaaacatgt
ggatttaaatatcaagaatttctcttgtctccaacctgtcttggcattcccaattctagg
ctgcggtattttctaattgcaaagcttcaccacgagccgtttttctttcatgttcctggt
cagatattgacaagattcccagatcagaatctagaagagttatccaaggatgaagttgtt
gacgaagctagttcttccttgccttctggagagaagagtctactttcaaacactggttct
gattgcagcagcaagaatggacccttgccaaaagaggcctttctttttaagcttgaaaca
gtagaagaaatgataaggaagcatagtcaagacaatgatccctctattcaaatgttacaa
gatttcctggaagatgagaatgaagaaatgagtcagtattttttagcacccaagtccttg
ctacgctacgctttcttgttagacattgttaaacccacttgccggagatccacatgcttt
acaaaagggtatgggcactatgtggaagggacaggctcagttcttcagacagcagtagat
gtgcagcttgaatcagtgtttaagcacattgagaacttaacagaagaagagaagcttatg
aaactgtcaacgctaaaactgaggtattttactccaagagaaatagcaaatctgcatgga
ttccctccagaatttggctttcctgacaaagtatcaataaagcaatgctaccgtcttctg
ggaaacagcctcaacgtacacgtggtggcaaagttgatctccattctactcggataa
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